Query= MSMg01no116_n21.b1 MSMg01no116_n21.b1 CHROMAT_FILE:
MSMg01no116_n21.b1 PHD_FILE: MSMg01no116_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:14 2005
(472 letters)
>mm_chr9_78240139_78241010
Length = 872
Score = 870 bits (450), Expect = 0.0
Identities = 463/472 (98%), Gaps = 8/472 (1%)
Strand = Plus / Minus
Query: 1 acccatgattttggttttttgtttgtttgtttgtttgtttgtttggttttggtttttcga 60
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 857 acccatgattttggttt--------tttgtttgtttgtttgtttggttttggtttttcga 806
Query: 61 gacagggtttctctgtgtcgccctggctgtcctggaactcactctgtagaccaggctggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gacagggtttctctgtgtcgccctggctgtcctggaactcactctgtagaccaggctggc 746
Query: 121 ctcgagctcagaaattcacctgcctctgcttcccaagtgctgggattaaaggcgtgcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctcgagctcagaaattcacctgcctctgcttcccaagtgctgggattaaaggcgtgcacc 686
Query: 181 accatgcctggcttgtacccatgatttttagatttgctcttgccttcccaaagtgatagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 accatgcctggcttgtacccatgatttttagatttgctcttgccttcccaaagtgatagg 626
Query: 241 cagggctgaaccattctggcacatgatctacattggctcacgcagagggaattgtaactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagggctgaaccattctggcacatgatctacattggctcacgcagagggaattgtaactt 566
Query: 301 ccgtggctgcagtccttaccagggccacaggagccctatgaagagtttgctgaagcaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccgtggctgcagtccttaccagggccacaggagccctatgaagagtttgctgaagcaata 506
Query: 361 tttctggctatcatctccccagtataatatgcctatgcttaccaagccaatgcgtatagc 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttccggctatcatctccccagtataatatgcctatgcttaccaagccaatgcgtatagc 446
Query: 421 tgaagctttgtgggtaggcagccctaatccttgcagtgggttgcattggcac 472
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgaagctttgtgggtaggcagccctaatccttgcagtgggttgcattggcac 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_n21.g1 MSMg01no116_n21.g1 CHROMAT_FILE:
MSMg01no116_n21.g1 PHD_FILE: MSMg01no116_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:14 2005
(284 letters)
>mm_chr9_78059679_78060362
Length = 684
Score = 534 bits (276), Expect = e-156
Identities = 282/284 (99%)
Strand = Plus / Plus
Query: 1 aattcccagcaaccacatgatgtttcacaaccatctgtagtgggatctcatgccctcttc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 aattcccagcaaccacatgatgtttcacaaccatctgtagtgggatctgatgccctcttc 260
Query: 61 tggtgtgtctgaaggcattttcttaatcgagtctcctccaatgaccctaacttacatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtgtgtctgaaggcattttcttaatcgagtctcctccaatgaccctaacttacatcaa 320
Query: 121 gttgtcacaaaccagccaacacagaccctcaaatgaataggtaatcctttggggcaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgtcacaaaccagccaacacagaccctcaaatgaataggtaatcctttggggcaaatg 380
Query: 181 taaaattctggtcttttcctcctatgttgattgtctctggtagacaagagttgcacacag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 taaaattctggtcttttcctcctatgttgattgtctctggtagacaagagttgcactcag 440
Query: 241 agttgtcatcctaactgggttggatccagaggatctggctagaa 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttgtcatcctaactgggttggatccagaggatctggctagaa 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
