Query= MSMg01no117_n22.b1 MSMg01no117_n22.b1 CHROMAT_FILE:
MSMg01no117_n22.b1 PHD_FILE: MSMg01no117_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:33 2005
(311 letters)
>mm_chr9_7886920_7887630
Length = 711
Score = 532 bits (275), Expect = e-155
Identities = 302/311 (97%)
Strand = Plus / Plus
Query: 1 tgctaccagactttggaagctcacaaacacacactggcacattgattggtaacttctcca 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 tgctaccagactttggaagctcacaaacacacactggcacattcattggtaacttctcca 260
Query: 61 gtcagcaggaaggaccctaatttcccagatcgaacctggccagctttggggggaggggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcagcaggaaggaccctaatttcccagatcgaacctggccagctttggggggaggggga 320
Query: 121 ggttcccacacccctagtctgttctcagggcctgtgtgctcactttgtgacacaggccta 180
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggctcccacactcctagtctgttctcagggcctgtgtgctcactttgtgacacaggccta 380
Query: 181 aacctgcctagacaaactcattatttgtcacacaaccatgtgccactgctgccagctttc 240
|| ||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||
Sbjct: 381 aatctgcctagacaaactcattgtttgtcacacaaacttgtgccactgctgccagctttc 440
Query: 241 ttattctggctctagccatatgtctctttgctaatacaaaaatatgcttttctctaccta 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttattctggttctagccatatgtctctttgctaatacaaaaatatgcttttctctaccta 500
Query: 301 cataacctgtc 311
|| ||||||||
Sbjct: 501 cacaacctgtc 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_n22.g1 MSMg01no117_n22.g1 CHROMAT_FILE:
MSMg01no117_n22.g1 PHD_FILE: MSMg01no117_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:33 2005
(554 letters)
>mm_chr9_7945275_7946228
Length = 954
Score = 1056 bits (546), Expect = 0.0
Identities = 552/554 (99%)
Strand = Plus / Minus
Query: 1 ctaatttttcataaatcctaggtttatttaattagttcagggccagcctggtctacatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 ctaatttttcataaatcctaggtttatttaattagttcagggccagcctggtctacatgg 705
Query: 61 tgaattccaagccattcagggctacatagtaagacaatggtattgcagagtagttaccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tgaattccaagccattcagggctacatagtaagacaatggtattgcagagtagttaccct 645
Query: 121 tacaccctgtacactgctaatagtttacatctttgatttactaactaaaattctcttgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tacaccctgtacactgctaatagtttacatctttgatttactaactaaaattctcttgag 585
Query: 181 gaagtgatgccataaagagctttctggttttttcttgtttggcttttgctttttaagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gaagtgatgccataaagagctttctggttttttcttgtttggcttttgctttttaagttc 525
Query: 241 tgagtcaaaaaagaccaaactctagaaatctgtcagaaacagcccaatttaatatgttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tgagtcaaaaaagaccaaactctagaaatctgtcagaaacagcccaatttaatatgttta 465
Query: 301 ttttagaaataatgaagaactttatgacttaaaggtgagttgcgaaatgagacaaatacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ttttagaaataatgaagaactttatgacttaaaggtgagttgcgaaatgagacaaatacg 405
Query: 361 accctggtctgtcttggtttagtttttgaatcagggttgaccttgaacttggatcaccac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 accctggtctgtcttggtttagtttttgaatcagggttgaccttgaacttggatcaccac 345
Query: 421 catacctggctaagaccttgaacaattgcagcttataaattgttggtttagcggggcagt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 344 catacctggctaagaccttgaacaattgcagcttataaattgttggtttagccgggcagt 285
Query: 481 ggtggcccacgcctttaatcccagcacttgggaggcaaagacaggcagatttctgagttc 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ggtggcccatgcctttaatcccagcacttgggaggcaaagacaggcagatttctgagttc 225
Query: 541 aaggacaaccaggg 554
||||||||||||||
Sbjct: 224 aaggacaaccaggg 211
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
