Query= MSMg01no119_l24.b1 MSMg01no119_l24.b1 CHROMAT_FILE:
MSMg01no119_l24.b1 PHD_FILE: MSMg01no119_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:59 2005
(456 letters)
>mm_chr9_7650235_7651090
Length = 856
Score = 843 bits (436), Expect = 0.0
Identities = 451/456 (98%)
Strand = Plus / Plus
Query: 1 gaattcaccaccatttcccctcaggtccaatcaggggcaatcattaccttccacctaatt 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcaccaccatttcccatcaggtccaatcaggggcaatcattaccttccacctaatt 260
Query: 61 ccagtcaggggcaaggtatatcctaatgtatttcctgcccatgcacttccagcccacatg 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagtcaggggcaaggtatatcctgatgtatttcctgcccatgcacttccagcccacatg 320
Query: 121 tggccaagcacacgtagtggagttgggtcaaacaaatctgtttagggaagtgaaaacatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggccaagcacacgtagtggagttgggtcaaacaaatctgtttagggaagtgaaaacatg 380
Query: 181 tgtcatgttatctccacaatagcctcaaacatctcaggaagtacctgtccttgggcaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcatgttatctccacaatagcctcaaacatctcaggaagtacctgtccttgggcaagg 440
Query: 241 gcttacaggtcagaggcgtttttgtttcatagacctcttatgtattaaaacagaactttg 300
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 441 gcttacaggtcagaggcgtttttgtttcatagacctcttaggcattaaaacagaactttg 500
Query: 301 gctctcacagtcccaagagtgtacagttcccagaggatctgtttcctctagggtggctag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctctcacagtcccaagagtgtacagttcccagaggatctgtttcctctagggtggctag 560
Query: 361 atgagactatttccctagcacctccccttcctttcttagtacataacttttagctccctt 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 atgagactatttccctagcacctccccttcctttctcagtacataacttttagctccctt 620
Query: 421 ttccttggtttttgctctttagaatgtcttttactg 456
||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttccttggtttttgctctttagaatgtcttttactg 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_l24.g1 MSMg01no119_l24.g1 CHROMAT_FILE:
MSMg01no119_l24.g1 PHD_FILE: MSMg01no119_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:59 2005
(363 letters)
>mm_chr9_7826708_7827470
Length = 763
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Minus
Query: 115 ttgtacccctttctaagtgcagacttattcccttttttgttgtataagtggaatgaaaca 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttgtacccctttctaagtgcagacttattcccttttttgttgtataagtggaatgaaaca 504
Query: 175 gaaaaaaataatagaatgcaccaacacaatgagaatgtggtgtgtgacagttggtttctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gaaaaaaataatagaatgcaccaacacaatgagaatgtggtgtgtgacagttggtttctg 444
Query: 235 ttatactaaatgtctactgggttgtgatataaacagggttttatgggttataatgaagac 294
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttatactaaatgtctactgggttgtgatataaacagggttttatgggttataatgaagat 384
Query: 295 gatttgaaagtcactcctatagaataatcagtttatttttgatatgaagtacttaaaaat 354
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 383 gatttgaaagtcactcctatagaatagtcagtttatttttgatatgaagtacttaaaaat 324
Query: 355 agtttttgt 363
|||||||||
Sbjct: 323 agtttttgt 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
