Query= MSMg01no124_c17.b1 MSMg01no124_c17.b1 CHROMAT_FILE:
MSMg01no124_c17.b1 PHD_FILE: MSMg01no124_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:54 2005
(277 letters)
>mm_chr9_27011922_27012598
Length = 677
Score = 505 bits (261), Expect = e-147
Identities = 273/277 (98%)
Strand = Plus / Plus
Query: 1 ggaaagggcaggagagtgggtaaagccttgggacccccctccaagaggtatcatagacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaaagggcaggagagtgggtaaagccttgggacccccctccaagaggtatcatagacca 260
Query: 61 cactgagggggcatggccgccatctctaggaggctgagtaattagtgaattgagaaaagc 120
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 cactgagggggcatggctgccatctctaggaggctgagtaattagtgaatggagaaaagc 320
Query: 121 tttattagtcactgctgagaagaagcacaacaggtattacccaatcagctaatggagggc 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tttattagtcactgctgagaagaagcacaacaggtattatccaatcagctaatggagggc 380
Query: 181 ttcatggttttcaagaggctgctataaggagggaattttgttctcttctctctttgcccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcatggttttcaagaggctgctataaggagggaattttgttctcttctctctttgcccc 440
Query: 241 cagaagactcatggtgctgagagcagatggtgagggg 277
||||||||||||||||||||||||||| |||||||||
Sbjct: 441 cagaagactcatggtgctgagagcagacggtgagggg 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no124_c17.g1 MSMg01no124_c17.g1 CHROMAT_FILE:
MSMg01no124_c17.g1 PHD_FILE: MSMg01no124_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:54 2005
(120 letters)
>mm_chr9_27158494_27159011
Length = 518
Score = 209 bits (108), Expect = 5e-59
Identities = 117/120 (97%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 1 ttttgttttgttttgtttttttaaatggggtcatgaaacaacttcaatcctcttggcaat 60
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttttgtttt-tttt-tttttttaaatggggtcatgaaacaacttcaatcctcttggcaat 261
Query: 61 ccctgacaccaaacatctggtgcagacagtgtattttttctgaaagcttatttggaagca 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccatgacaccaaacatctggtgcagacagtgtattttttctgaaagcttatttggaagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 120
Length of database: 518
Length adjustment: 8
Effective length of query: 112
Effective length of database: 510
Effective search space: 57120
Effective search space used: 57120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
