Query= MSMg01no127_b20.b1 MSMg01no127_b20.b1 CHROMAT_FILE:
MSMg01no127_b20.b1 PHD_FILE: MSMg01no127_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:45 2005
(387 letters)
>mm_chr9_79530277_79531063
Length = 787
Score = 679 bits (351), Expect = 0.0
Identities = 378/387 (97%)
Strand = Plus / Plus
Query: 1 cacaaggaatgctaaagttcaaaagtacagagttagaaattttattcaggccttttcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacaaggaatgctaaagttcaaaagtacagagttagaaattttattcaggccttttcaga 260
Query: 61 agctgcagtctgtaaatgtctggtcagggtcagtacaattgacacaaaccctctcattgc 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctgcagtctgtaaatgtctggccagggtcagtacaattgacacaaaccctctcattgc 320
Query: 121 tgtgtgtataagacaatgaacacaaaataggcaattctgacacattaaaacatctcataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 tgtgtgtataagacaatgaacacaaaataggcaattctgacacattaaaacatctcaaaa 380
Query: 181 gctagcagatgaaagcacacacatcaagtattttagaaagtgctgtacattaatacctat 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 gctagcagatgaaagcacacacatcaagtattttagaaagtgctgtagattaatacctat 440
Query: 241 ctaacacatagcttacatcattattaaactagctctttcattaatatttcatattatgaa 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 ctaacacatagcttacatcattattaagctagctctttcattaatatttcatattatgaa 500
Query: 301 taaccctcacaaatagatcaccaaatatcttcaaacaacctatatcccctcccccacaat 360
||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 501 taaccctcaaaaatagatcaccaaatatcttcaaacaacctatatcccctttcttacaat 560
Query: 361 ggctttacttgccagatcattcaattc 387
|||||||||||||||||||||||||||
Sbjct: 561 ggctttacttgccagatcattcaattc 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_b20.g1 MSMg01no127_b20.g1 CHROMAT_FILE:
MSMg01no127_b20.g1 PHD_FILE: MSMg01no127_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:45 2005
(549 letters)
>mm_chr9_79668640_79669588
Length = 949
Score = 770 bits (398), Expect = 0.0
Identities = 427/438 (97%), Gaps = 4/438 (0%)
Strand = Plus / Minus
Query: 1 cggaggcctgcttgctggctgagctgtatgccagcactgctgcttactctgtgtgtatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cggaggcctgcttgctggctgagctgtatgccagcactgctgcttactctgtgtgtatgt 396
Query: 61 gacaggttacatgtgctcccatgtcccacccaccacatgaaggtgaagtagcaatagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gacaggttacatgtgctcccatgtcccacccaccacatgaaggtgaagtagcaatagttt 336
Query: 121 tttcataggcttctggttaggataaagtacacgagttcccggaatacaaaacacagtatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tttcataggcttctggttaggataaagtacacgagttcccggaatacaaaacacagtatc 276
Query: 181 taaagtccttcttgttgcacaagttaaggtactatgtcacatgttcaacttatgaatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 taaagtccttcttgttgcacaagttaaggtactatgtcacatgttcaacttatgaatgtc 216
Query: 241 ataagttaaacaattcagcaagcaaatcataaaacagaaactagtgccctctgagccctt 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 215 ataaattaaacaattcagcaagcaaatcataaaacagaaactagtgccctctgagtcctt 156
Query: 301 ctctgagccctactagttcctgtgcctcttcaagggg-aactgccaccctgacttctcat 359
||||||| |||||||||||||||||||||||||| |||||| | |||||||||||||
Sbjct: 155 ctctgagg---actagttcctgtgcctcttcaagggggaactgctatcctgacttctcat 99
Query: 360 tcgttttgctgatagccattggcaaaccgtactattctgaagttaaaaagggaccttggt 419
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 ttgttttgctgatagccattggcaaaccgtactattctgaagttaaaaagggaccttggt 39
Query: 420 gtagcattataaatatat 437
||||||||||| ||||||
Sbjct: 38 gtagcattatatatatat 21
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
