Query= MSMg01no131_f13.b1 MSMg01no131_f13.b1 CHROMAT_FILE:
MSMg01no131_f13.b1 PHD_FILE: MSMg01no131_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:32 2005
(187 letters)
>mm_chr9_86909426_86910012
Length = 587
Score = 362 bits (187), Expect = e-105
Identities = 187/187 (100%)
Strand = Plus / Plus
Query: 1 gcagatttgtagagatgatacaccagggcttactggagagagatactgacaagagtttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcagatttgtagagatgatacaccagggcttactggagagagatactgacaagagtttga 260
Query: 61 gagaaagtcaagaggctgtgggaaggcactgaaaccacatgacaactgtctcagcccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaaagtcaagaggctgtgggaaggcactgaaaccacatgacaactgtctcagcccctc 320
Query: 121 ttggatgtaacaatcaggttttcatagttcatttcttcttgcctaagattgtccatcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggatgtaacaatcaggttttcatagttcatttcttcttgcctaagattgtccatcccc 380
Query: 181 ttcaagt 187
|||||||
Sbjct: 381 ttcaagt 387
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no131_f13.g1 MSMg01no131_f13.g1 CHROMAT_FILE:
MSMg01no131_f13.g1 PHD_FILE: MSMg01no131_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:32 2005
(252 letters)
>mm_chr9_87017557_87018207
Length = 651
Score = 395 bits (204), Expect = e-114
Identities = 242/256 (94%), Gaps = 8/256 (3%)
Strand = Plus / Minus
Query: 1 tctataatgtaaaa-aaactaaagaaaattgacctgagtaccattttctgaagcccatag 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tctataatgtaaaacaaactaaagaaaattgacctgagtaccattttctgaagcccatag 533
Query: 60 ggtggaaagcatgcattggttcccagaagttgccctatgatctccagagaagcagccatg 119
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 532 ggtggaaagcatgcatcggttcccagaagttgccctatgatctccagagaagcacccatg 473
Query: 120 acacattcatgtgcacatgcatgtgataaagaaacaaatc-taaaaactacatcaaaa-- 176
|||||||||||||||||||||||||||||||||||||| | ||||||| | | |||||
Sbjct: 472 acacattcatgtgcacatgcatgtgataaagaaacaaa-cataaaaacaaaa-caaaaca 415
Query: 177 aaaaaccccaaaaaaacaaaaaaaccctcaaaacgacagaagatggctttcccttgtcta 236
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aaaaaccc--aaaaagcaaaaaaaccctcaaaacgacagaagatggctttcccttgtcta 357
Query: 237 aagacttgcctcccct 252
|||||| |||||||||
Sbjct: 356 aagactagcctcccct 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 651
Length adjustment: 9
Effective length of query: 243
Effective length of database: 642
Effective search space: 156006
Effective search space used: 156006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
