Query= MSMg01no131_g22.b1 MSMg01no131_g22.b1 CHROMAT_FILE:
MSMg01no131_g22.b1 PHD_FILE: MSMg01no131_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:39 2005
(242 letters)
>mm_chr9_73968105_73968746
Length = 642
Score = 429 bits (222), Expect = e-125
Identities = 237/242 (97%)
Strand = Plus / Plus
Query: 1 tgccctcttctggcttctgtgggcactgcactcatgtgcttatctcatgtgcacataatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgccctcttctggcttctgtgggcactgcactcatgtgcttatctcatgtgcacataatt 260
Query: 61 aaaacataatgaaatatatcttttaaaaatggactacatggatgcctcacaataaacttt 120
|||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||
Sbjct: 261 aaaacataatgaaatagatcttttaaaaatggactagatggttgcctcagaataaacttt 320
Query: 121 tcttttggtttaaaaaaaaatggactagatggttttaagtttaaaaaatggctttcagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttttggtttaaaaaaaaatggactagatggttttaagtttaaaaaatggctttcagta 380
Query: 181 taaatctttgaatagttaagtgtagcacaatctaaaacaaagctacacaacaacaacaac 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaatcttcgaatagttaagtgtagcacaatctaaaacaaagctacacaacaacaacaac 440
Query: 241 aa 242
||
Sbjct: 441 aa 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no131_g22.g1 MSMg01no131_g22.g1 CHROMAT_FILE:
MSMg01no131_g22.g1 PHD_FILE: MSMg01no131_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:39 2005
(585 letters)
>mm_chr9_74068965_74069956
Length = 992
Score = 986 bits (510), Expect = 0.0
Identities = 566/588 (96%), Gaps = 10/588 (1%)
Strand = Plus / Minus
Query: 1 attagctctcatagttttggtggagtctttgaaaacagaggtaacttcactttctctcat 60
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 937 attagctctcatagttttggtggagtctttgagaacagaggtaacttc-ctttctctcat 879
Query: 61 gtttgcaagttttctttctcttgcttgataactcttggtaaaattcctagaccataaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 gtttgcaagttttctttctcttgcttgataactcttggtaaaattcctagaccataaaga 819
Query: 121 ggaaaagtgataggagtaaatatctcgtcttcctcatctattatgatgctggttatgggt 180
|||| || |||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 818 ggaatagcgataagagtaaatatctcgtcttcctcatctattatgatgctggttatgagt 759
Query: 181 gtggggcgagcagtgagttctggatggttctctttgtcatcacacatcacagagggttta 240
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 758 gtggggtgagcagtgagttctgggtggttctctttgtcatcacacatcacagagggttta 699
Query: 241 tttctttggttgttttggtttcgttttctccacaacataatggtatgaaaatatatctg- 299
|||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 698 tttctttggttggtttggtttggttttctccacagcataatggtatgaaaatatatctgt 639
Query: 300 ---aatagattctcattaaatggtttagagtatacaaagaattctgaatacactaaactg 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ctgaatagattctcattaaatggtttagagtatacaaagaattctgaatacactaaactg 579
Query: 357 tactagtgtgat---ggacattattattgtcattgttattctggaaggctggggataaga 413
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 578 tactagtgtgataatggacattatcattgtcattgttattctggaaggctggggataaga 519
Query: 414 gacgacacaataaaacttgaaaagaatacatatataaagagagaaaattcttcctgaaat 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gacgacacaataaaacttgaaaagaatacatatataaagagagaaaattcttcctgaaat 459
Query: 474 tccttgaaa-gaaaatcatatatatcaggatggcatttgtgatcctagctaccagctgcc 532
|||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 458 tcct-gaaaagaaaatcatatatatcaggatggcatttgtgatcctagctaacagctgcc 400
Query: 533 ttcccccacctcaaccatattcttggaggtctcctgttgatccttcag 580
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttcccccacctcaaccatattcttggaggtctcctgttgatccttcag 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 992
Length adjustment: 10
Effective length of query: 575
Effective length of database: 982
Effective search space: 564650
Effective search space used: 564650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
