Query= MSMg01no132_b02.b1 MSMg01no132_b02.b1 CHROMAT_FILE:
MSMg01no132_b02.b1 PHD_FILE: MSMg01no132_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:29 2005
(549 letters)
>mm_chr9_14880605_14881553
Length = 949
Score = 988 bits (511), Expect = 0.0
Identities = 541/551 (98%), Gaps = 4/551 (0%)
Strand = Plus / Plus
Query: 1 ggttcatctaggttcacttggattcagctgaactccccggggttcctttgggttaacctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggttcatctaggttcacttggattcagctgaactccccggggttcctttgggttaacctg 260
Query: 61 aggttcatgggaactcacctaggggtcatgcagattccactagcttcacgtgaacttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggttcatgggaactcacctaggggtcatgcagattccactagcttcacgtgaacttgcc 320
Query: 121 taaggctt-atgtgacttccatgggattgtgaacaaagtcatgtaaaggactaccaagtc 179
|||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 taag-ctttatgtgacttccatgggattgtgagcaaagtcatgtaaaggactaccaagtc 379
Query: 180 tgcttcttggttaacaactcctttttcttttacactctatatctgtactgaaatagccag 239
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 380 tgcttcttggttaacaactcctttatcttttacactctatatctgtactgaaatagccag 439
Query: 240 aaatctgattctaatcaaaactatatctgtttctagagtctttgccgtgccaaggtc-ta 298
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||
Sbjct: 440 aaatctgattctaatcaaaactatatctgtttctagagtctctgccgtgccaagg-cata 498
Query: 299 ccagcttttcttggatgatgattttgtaaggtcaagttggaatctgagcccctgtgacgg 358
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 499 ccagcttttcttggatgatgattttgtgaggtcaagttggaatctgagcccctgtgatgg 558
Query: 359 ccctggcaggtttacctgaatggtctggctgcatgtatgctgttgtggccatatggggaa 418
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 559 ccctggcaggtttacctgaatggtctggctgcatgtatgccgttgtggccatatggggaa 618
Query: 419 acagagccagggagtcacgatgagtccctcgtaggtggatggtgttgccttggaaataaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 acagagccagggagtcacgatgagtccctcgtaggtggatggtgttgccttggaaataaa 678
Query: 479 ctccatgcatatctgtgtcggtgcccattccaatcaagtgccaggaaactctgtccttct 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ctccatgcatatctgtgtcggtgcccattccaatcaagtgccaggaaactctgtccttct 738
Query: 539 tgcacatgctc 549
|||||||||||
Sbjct: 739 tgcacatgctc 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_b02.g1 MSMg01no132_b02.g1 CHROMAT_FILE:
MSMg01no132_b02.g1 PHD_FILE: MSMg01no132_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:29 2005
(432 letters)
>mm_chr9_15018264_15019095
Length = 832
Score = 654 bits (338), Expect = 0.0
Identities = 369/380 (97%), Gaps = 3/380 (0%)
Strand = Plus / Minus
Query: 1 cttggggaggcagatagatctgtgggcctgccaatggagcttggggaacagcatgctgtt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 380 cttggggaggcagatagatctgtgggcctgccaatggagcttggggaatagcatgctgtt 321
Query: 61 acttctgttggttgtaccccaggggaacctggcagacagggcattggtggacatagcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acttctgttggttgtaccccaggggaacctggcagacagggcattggtggacatagcctg 261
Query: 121 gatgctccaggggcacagcaggcctcctttggaaggcaggcagagccatggaccagaaga 180
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 catgctctgggggcacggcaggcctcctttggaaggcaggcagagccatggaccagaaga 201
Query: 181 tggaacctctgggaacttttgagagggtataaatgccagagccccaacaggggctggatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tggaacctctgggaacttttgagagggtataaatgccagagccccaacaggggctggatg 141
Query: 241 tgctccaagt--gctgctgttgtttcctgttgctgcggtttattaagtggttgtgagcaa 298
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 140 tgctccaagtaggctgctgttgtttcctgttgctgtggtttattaagtggttgtgagcaa 81
Query: 299 agagacaagaagaagatatgggatatccgtat-gaggaagattggactggccccaagaaa 357
||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||
Sbjct: 80 agagacaagaagaagatatgggatatctgtatgggggaagattggactggccccaagaaa 21
Query: 358 ctcagtgccactaattagca 377
||||||||||||||||||||
Sbjct: 20 ctcagtgccactaattagca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
