Query= MSMg01no132_e02.b1 MSMg01no132_e02.b1 CHROMAT_FILE:
MSMg01no132_e02.b1 PHD_FILE: MSMg01no132_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:43 2005
(617 letters)
>mm_chr9_59162922_59163937
Length = 1016
Score = 1100 bits (569), Expect = 0.0
Identities = 602/613 (98%), Gaps = 1/613 (0%)
Strand = Plus / Plus
Query: 5 gaattccagcaagatcacggcttgggaactaggcttgtgagtgtcagaacagttcctaga 64
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagcaagaacatagcttgggaactaggcttgtgagtgtcagaacagttcctaga 264
Query: 65 tcaaattggaatagagccaaagaaatcacagcagattaaactgtacagatacattccagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaaattggaatagagccaaagaaatcacagcagattaaactgtacagatacattccagc 324
Query: 125 ctgttggcaacataaaaacacttcaggtataattgaaactcagctgtctactaacgagac 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 325 ctgttggcaacataaaaacacttcaggtataattgaaactcagctgtctactaatgagac 384
Query: 185 tggatttttgttttttatgttgtgctacaaaggttaaaacctctttctgaatccccagtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggatttttgttttttatgttgtgctacaaaggttaaaacctctttctgaatccccagtt 444
Query: 245 gatgtaccatgactctggagagctcatccagccacagaaagtactcccccccccccccca 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatgtaccatgactctggagagctcatccagccacagaaagtactcccccccccccccc- 503
Query: 305 caagcctgatcactcatgaaacctggccaaggcagtcatgacagcttatgctcctggcag 364
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 caagcctggtcactcatgaaacctggccaaggcagtcatgacagcttatgctcctggcag 563
Query: 365 aatcaacttgtccattcagtgttacagtgacaatatttgctgtgtgtaccttctcagcct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aatcaacttgtccattcagtgttacagtgacaatatttgctgtgtgtaccttctcagcct 623
Query: 425 cctgctctcagacataggtcagagccacaggagagaacaaaacagtcttgtgctttatgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cctgctctcagacataggtcagagccacaggagagaacaaaacagtcttgtgctttatgg 683
Query: 485 tctcagactggaaacccctgggagagctatgagccacctgaccattgtgcacttgcttgg 544
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 684 tctcagactggaaacccctgggagagctatgagccacctgaccattctgcacttgcttgg 743
Query: 545 aagcatcatgccttcctgccccggcttcatggactggggctggctgaggaaaggccccac 604
||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 744 aagcaccatgccttcctgccccggcgtcatggactggggctggctgagaaaaggccccac 803
Query: 605 agcttgttttcag 617
|||||||| ||||
Sbjct: 804 agcttgttctcag 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1016
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1006
Effective search space: 610642
Effective search space used: 610642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_e02.g1 MSMg01no132_e02.g1 CHROMAT_FILE:
MSMg01no132_e02.g1 PHD_FILE: MSMg01no132_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:43 2005
(602 letters)
>mm_chr9_59272778_59273777
Length = 1000
Score = 698 bits (361), Expect = 0.0
Identities = 386/397 (97%), Gaps = 9/397 (2%)
Strand = Plus / Minus
Query: 1 ctggtataaacccagctgctgatttcctgggccagtgctgtttttgtggcccaggtttgt 60
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ctggtataaaccc-gctgctggtttcctgggccagtgctgtttttgtggcccaggtttgt 335
Query: 61 cagttgacttaatttcaggatgccaagcacattgaggtcttgaatgatccatatacaaat 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 334 cagttgacttaatttcaggatgccaagcacattgaggtcttgaat-atccatatacaaat 276
Query: 121 tgtataagtggttttattgcctatacagaaagttttttctgtgaataaaaagtaataaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tgtataagtggttttattgcctatacagaaagttttttctgtgaataaaaagtaataaag 216
Query: 181 gaaaataacagcagtgtttttttttttttaag----atttattattattcattagtacac 236
|||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 215 gaaaatgacagca--gtttttttttttttaagatttatttattattattcattagtacac 158
Query: 237 tgtagctgtcttcagatgcaccagaagagggcgtcagatctcattacggatagctgtgag 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tgtagctgtcttcagatgcaccagaagagggcgtcagatctcattacggatagctgtgag 98
Query: 297 ccaccatgtggttgctggga-ttgaactcaggacctttggaagagcagtcagtgctctta 355
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 97 ccaccatgtggttgctgggatttgaactcaggacctttggaagagcagtcagtgctctta 38
Query: 356 accgctgagccatttcaccagccccagcagtgttttt 392
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 accgctgagccatttcaccagccccagcagtgttttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1000
Length adjustment: 10
Effective length of query: 592
Effective length of database: 990
Effective search space: 586080
Effective search space used: 586080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
