Query= MSMg01no134_m17.b1 MSMg01no134_m17.b1 CHROMAT_FILE:
MSMg01no134_m17.b1 PHD_FILE: MSMg01no134_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:33 2005
(651 letters)
>mm_chr9_28845964_28847015
Length = 1052
Score = 1174 bits (607), Expect = 0.0
Identities = 640/651 (98%), Gaps = 1/651 (0%)
Strand = Plus / Minus
Query: 1 acttccaaaatttcaaacaatgtgctttcaacacacatcttataatgttgttatgtttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 acttccaaaatttcaaacaatgtgctttcaacacacatcttataatgttgttatgtttta 792
Query: 61 ttgccaaaagtaactacatattgatattccagaaatgccgcagggcctttatttaactag 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ttgccaaaagtaacttcatattgatattccagaaatgccgcagggcctttatttaactag 732
Query: 121 ttgctattttacttcaaaaaaataaataatgcttcctgtttttacttttacttatctgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ttgctattttacttcaaaaaaataaataatgcttcctgtttttacttttacttatctgga 672
Query: 181 ataagtagatattgacatctgctgaagtcagtataaagatttatttacctgagttcaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ataagtagatattgacatctgctgaagtcagtataaagatttatttacctgagttcaaat 612
Query: 241 agtgaccaatagggagtctggctcactgtttatattgaattattataaattgtaatattg 300
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 611 agtgaccaatagggagtctggctcactgtttatattgaaggacaataaattgtaatattg 552
Query: 301 actgggctgagacatcaatatttgcattgtcgtaaacattttaaaaatcttcatgaaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 actgggctgagacatcaatatttgcattgtcgtaaacattttaaaaatcttcatgaaata 492
Query: 361 ttccccagaaattttcctgtcatcagagtggctgagctagggctgtatgaagaacagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttccccagaaattttcctgtcatcagagtggctgagctagggctgtatgaagaacagctt 432
Query: 421 gtgtatggaagctactagataacct-ataaaagccgtaaattgttcttacttccaacttc 479
|||||||||||||||||| |||||| | ||||| ||||||||||||||| ||||||||||
Sbjct: 431 gtgtatggaagctactaggtaacctaaaaaaagtcgtaaattgttcttatttccaacttc 372
Query: 480 acacaaagacgcattgcatgtatgtttagtgttgatcattagaaatcttcaggttgcaac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 acacaaagacgcattgcatgtatgtttagtgttgatcattagaaatcttcaggttgcaac 312
Query: 540 ctcagaccacatcacccaagcacatgttcctgaacagagagagcctctgtcttgaacttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctcagaccacatcacccaagcacatgttcctgaacagagagagcctctgtcttgaacttt 252
Query: 600 agtcttgtgcatttcatgttgtgagagatacctcattgttgcaaaacagtg 650
||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 251 agtcttgtgcatttcatgttgtgagagatgcctcattgttgcaaaacagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_m17.g1 MSMg01no134_m17.g1 CHROMAT_FILE:
MSMg01no134_m17.g1 PHD_FILE: MSMg01no134_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:34 2005
(685 letters)
>mm_chr9_28684292_28685375
Length = 1084
Score = 1294 bits (669), Expect = 0.0
Identities = 681/685 (99%), Gaps = 1/685 (0%)
Strand = Plus / Plus
Query: 1 aaagaagccacacacagtaaatatctaaataaaaccccaaagccatctgtaacatttcaa 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagaagccacaca-agtaaatatctaaataaaaccccaaagccatctgtaacatttcaa 259
Query: 61 ttattgctacagaactcagcctatggaattctccccaagaggcatctttccattccgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttattgctacagaactcagcctatggaattctccccaagaggcatctttccattccgggg 319
Query: 121 cttcttaaacatagtatatttgatatttgtaaccttatttaaaggactcaaggtcatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cttcttaaacatagtatatttgatatttgtaaccttatttaaaggactcaaggtcatctt 379
Query: 181 tgtgaacaatgcttattgcatcaagctgcactttgggatagtcttcagagctattgaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtgaacaatgcttattgcatcaagctgcactttgggatagtcttcagagctattgaagt 439
Query: 241 gcatggttatttgcttctgcaaaagatagccacgagttgatacttttttgaattcgtgtg 300
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 440 gcatggttatttgcttctgcaaaagatagccacgagttgatacgcttttgaattcgtgtg 499
Query: 301 tccactttttatagtttatttttccctattcttcctggctgtcagcatagcagtcatcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tccactttttatagtttatttttccctattcttcctggctgtcagcatagcagtcatcaa 559
Query: 361 ttttcactgttgaaatttgacttgtctttagtcagcatacatcttcctgctgtctgctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttttcactgttgaaatttgacttgtctttagtcagcatacatcttcctgctgtctgctca 619
Query: 421 gtgtctctaagttcttgtttcggccttggctctcaaagtaagattcatctgggtagtcca 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 620 gtgtctctaagttcttgtttcggccatggctctcaaagtaagattcatctgggtagtcca 679
Query: 481 tcctttcgtcttagctccaaactttgtctctgtaactcctttcatgggtattttgttccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcctttcgtcttagctccaaactttgtctctgtaactcctttcatgggtattttgttccc 739
Query: 541 tattctaaggaggaataaagtatccacccattggtcttccctcttcttgattttcttgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tattctaaggaggaataaagtatccacccattggtcttccctcttcttgattttcttgtg 799
Query: 601 ttttgcaaattgtatcttgggtgttctatgtttctgggctaatatccacttatcagtgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttttgcaaattgtatcttgggtgttctatgtttctgggctaatatccacttatcagtgag 859
Query: 661 tgcatatctaatgccttcttttgtg 685
|||||||||||||||||||||||||
Sbjct: 860 tgcatatctaatgccttcttttgtg 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1084
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1074
Effective search space: 724950
Effective search space used: 724950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
