Query= MSMg01no136_i11.b1 MSMg01no136_i11.b1 CHROMAT_FILE:
MSMg01no136_i11.b1 PHD_FILE: MSMg01no136_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:56 2005
(273 letters)
>mm_chr9_70090675_70091347
Length = 673
Score = 422 bits (218), Expect = e-122
Identities = 233/238 (97%)
Strand = Plus / Plus
Query: 4 ggaattctctacagatcccttcaatgtttaaagtaaataaatgcaaatatttatataatg 63
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctacagagcagttcaatgtttaaagtaaataaatgcaaatatttatataatg 263
Query: 64 ctcattctgtgtcagcacagaagggggatatttaagactaggtttctttttttagaattt 123
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttattctgtgtcagcacagaagggggatatttaagactaggtttctttttttagaattt 323
Query: 124 tgtaaaatgtctttttaaaaacaagtgtatggtctggaggtgtagctcagggggagagaa 183
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 324 tgtaaaatgtctttttaaaaacaagtgtatggtctggaggtgtagctcagtgggagagaa 383
Query: 184 tgttctgtcctgggttctgtccctggcccctcgtcctgaagtcaatagtaagctaagc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgttctgtcctgggttctgtccctggcccctcgtcctgaagtcaatagtaagctaagc 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no136_i11.g1 MSMg01no136_i11.g1 CHROMAT_FILE:
MSMg01no136_i11.g1 PHD_FILE: MSMg01no136_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:56 2005
(531 letters)
>mm_chr9_70237098_70238028
Length = 931
Score = 911 bits (471), Expect = 0.0
Identities = 495/503 (98%), Gaps = 1/503 (0%)
Strand = Plus / Minus
Query: 1 ctaggacctggagtcggcctgggccaggttccagctgctcctgtagattgtgggttgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctaggacctggagtcggcctgggccaggttccagctgctcctgtagattgtgggttgaga 443
Query: 61 atattgctattggacatttgctagaaattttaagccttttgaaaatatgactccattagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atattgctattggacatttgctagaaattttaagccttttgaaaatatgactccattagg 383
Query: 121 agagtccttcctgactggagacacccaggcagcacttccagcttcctctttctcctctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agagtccttcctgactggagacacccaggcagcacttccagcttcctctttctcctctgc 323
Query: 181 tgcgtggccgcaagtcttgccacctagtacctgctcctgtgtttctgtttccctgcttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 322 tgcgtggccgcaagtcttgccacctagtacctgctcctgtgtttctgtttctctgcttct 263
Query: 241 agttaagcttaacctctggagcatcttgaaagctcctacagttactctctcatgaaacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agttaagcttaacctctggagcatcttgaaagctcctacagttactctctcatgaaacag 203
Query: 301 acgggctggagagatggctcagcggttgagggcactggctgcccccccagaggttctgag 360
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 202 acgggctggagagatggctcagcggttgagggcactggctgctcttccagaggttctgag 143
Query: 361 ttcaattcccagcaaccatatggtggctcacaaccatctgtgatgggatccaatgccttc 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 142 ttcaattcccagcaaccacatggtggctcacaaccatctgtgatgggatccaatgccctc 83
Query: 421 ttcttgtgtgtccaaagagaatgacagcgtactcatatacataaaataaataattaaaaa 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 82 ttcttgtgtgtccaaagagaatgacagtgtactcatatacataaaataaataatt-aaaa 24
Query: 481 aaaagaatttctaaagacagcaa 503
|||||||||||||||||||||||
Sbjct: 23 aaaagaatttctaaagacagcaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
