CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAAGATGCGCG
GAATTCCAGACCATTTCTTTTATAGACTTTACTTATTTTCTTTTTACATT
ATGTGTATGAGTGTTTTGCCTGCATGTGTATGCATGCCACTGCATGAAGT
GCCTGTAAGGCCAGAAGAGGGCACTAAATGCCCTGAAACTGGAGTTAATG
GACATTGTTAGCTGCCATTGGGTGGTGGGAATCAAACCTCAGTCCTCTGC
GAGAGCAGCCAGTGATCTTAACTGCTGAGCCATCTCTCTAGCCCAATTCC
AGGTAATCCTTAAGCAAATGGTTTTGGTTTCGTATGACTTAATGGCATAA
ACATTATCGTCCAGCCCACGAACACTGATGGGTGTAGGAAGGCACAGGAC
TAGGGGTTTGTGCAAACCCTGCCCTCAGACAGCAAAAGTAAGAGCATTCA
AAGCTCAGGCCTAGAGCAGAAGAGCCCAGAAATGCAGGGAAGCCTCTGGA
GTCTTCTTGAAGCCCACAAGACGGTGTTTTTACTCTGTGTGACCACGGAT
AGCACACCTTTCTTTGTAGATGTTTAACCTAATTCCAGCAATCATTCACA
CTGGATGAAATCACAGGGCAAAGTTTATGTGCATTTTCTATCCATGAAAT
ATGTAATCCCAAGATCTATATTCATCAACGTGAAGGTGCTACTCAAAATA
CCAAAAAAAGTTTCAACAGCN

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCATATTTTCTTTTCTGTCCTCTTGTCTGCTAA
CTTGACTTTTATCCTTTTCTCACTAAAATGCTTCCACTGAGAAGGACGTA
AGCGTAAAAAGCACAAAAAACATTTTAAGAAACGTTTTAAAGGTCTTGAT
CGCTCCAAAGGTAGGTACAAGCAGTTCTCTACCTGTGCTGTTTATACACC
TTGATTTCTGTCTAAGAAGGTAAAATGAACATTAGTGTGCAGCTTAAACA
TAAAACTAAACTTTATGCTGGAACTATTTGCCAGATTCTAAAATAAATCT
AAGGACCATAGCATACGTTGTAATTTCCGTTGTGTAGTGCCTTTAGCGCT
CTTTGACCATCGGTCGTGAGGTGTGTAAGATCTGCAAGTCTTGAGCTCCT
GTTTTTCTTTGTCATAGATAAGCCCAAAGAAGCAAAAAAGGATACATTTC
TGGAAAAATTGGCAACTCAAGTAATAAAAAATGTTCAAGTGAAAATTACA
GACATTCACATTAAATATGAAGATGATGTAAGTAATTTCAGTATTTTGCT
GGTCATTGAATGTGTTTTATGACCTTCTGTATCTTATGATGTTCCCTCTA
TAGATTAACTGAACCTAATTTAATTTAGGATAGCCACCCCTGTAA

Query= MSMg01no137_j10.b1 MSMg01no137_j10.b1 CHROMAT_FILE:
MSMg01no137_j10.b1 PHD_FILE: MSMg01no137_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:20 2005
         (366 letters)



>mm_chr9_67809654_67810419
          Length = 766

 Score =  656 bits (339), Expect = 0.0
 Identities = 342/343 (99%)
 Strand = Plus / Minus

                                                                       
Query: 24  tacattatgtgtatgagtgttttgcctgcatgtgtatgcatgccactgcatgaagtgcct 83
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 766 tacattatgtgtatgagtgttttgcctgcatgtgtatgaatgccactgcatgaagtgcct 707

                                                                       
Query: 84  gtaaggccagaagagggcactaaatgccctgaaactggagttaatggacattgttagctg 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gtaaggccagaagagggcactaaatgccctgaaactggagttaatggacattgttagctg 647

                                                                       
Query: 144 ccattgggtggtgggaatcaaacctcagtcctctgcgagagcagccagtgatcttaactg 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ccattgggtggtgggaatcaaacctcagtcctctgcgagagcagccagtgatcttaactg 587

                                                                       
Query: 204 ctgagccatctctctagcccaattccaggtaatccttaagcaaatggttttggtttcgta 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctgagccatctctctagcccaattccaggtaatccttaagcaaatggttttggtttcgta 527

                                                                       
Query: 264 tgacttaatggcataaacattatcgtccagcccacgaacactgatgggtgtaggaaggca 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgacttaatggcataaacattatcgtccagcccacgaacactgatgggtgtaggaaggca 467

                                                      
Query: 324 caggactaggggtttgtgcaaaccctgccctcagacagcaaaa 366
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 caggactaggggtttgtgcaaaccctgccctcagacagcaaaa 424


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 766
Length adjustment: 9
Effective length of query: 357
Effective length of database: 757
Effective search space:   270249
Effective search space used:   270249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no137_j10.g1 MSMg01no137_j10.g1 CHROMAT_FILE:
MSMg01no137_j10.g1 PHD_FILE: MSMg01no137_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:20 2005
         (520 letters)



>mm_chr9_67718383_67719302
          Length = 920

 Score =  998 bits (516), Expect = 0.0
 Identities = 519/520 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcatattttcttttctgtcctcttgtctgctaacttgacttttatccttttctcactaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatattttcttttctgtcctcttgtctgctaacttgacttttatccttttctcactaaa 260

                                                                       
Query: 61  atgcttccactgagaaggacgtaagcgtaaaaagcacaaaaaacattttaagaaacgttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcttccactgagaaggacgtaagcgtaaaaagcacaaaaaacattttaagaaacgttt 320

                                                                       
Query: 121 taaaggtcttgatcgctccaaaggtaggtacaagcagttctctacctgtgctgtttatac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaggtcttgatcgctccaaaggtaggtacaagcagttctctacctgtgctgtttatac 380

                                                                       
Query: 181 accttgatttctgtctaagaaggtaaaatgaacattagtgtgcagcttaaacataaaact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accttgatttctgtctaagaaggtaaaatgaacattagtgtgcagcttaaacataaaact 440

                                                                       
Query: 241 aaactttatgctggaactatttgccagattctaaaataaatctaaggaccatagcatacg 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaactttaagctggaactatttgccagattctaaaataaatctaaggaccatagcatacg 500

                                                                       
Query: 301 ttgtaatttccgttgtgtagtgcctttagcgctctttgaccatcggtcgtgaggtgtgta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtaatttccgttgtgtagtgcctttagcgctctttgaccatcggtcgtgaggtgtgta 560

                                                                       
Query: 361 agatctgcaagtcttgagctcctgtttttctttgtcatagataagcccaaagaagcaaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agatctgcaagtcttgagctcctgtttttctttgtcatagataagcccaaagaagcaaaa 620

                                                                       
Query: 421 aaggatacatttctggaaaaattggcaactcaagtaataaaaaatgttcaagtgaaaatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaggatacatttctggaaaaattggcaactcaagtaataaaaaatgttcaagtgaaaatt 680

                                                   
Query: 481 acagacattcacattaaatatgaagatgatgtaagtaatt 520
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acagacattcacattaaatatgaagatgatgtaagtaatt 720


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space:   464100
Effective search space used:   464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)