Query= MSMg01no138_g13.b1 MSMg01no138_g13.b1 CHROMAT_FILE:
MSMg01no138_g13.b1 PHD_FILE: MSMg01no138_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:26 2005
(301 letters)
>mm_chr9_46209136_46209835
Length = 700
Score = 540 bits (279), Expect = e-158
Identities = 297/305 (97%), Gaps = 5/305 (1%)
Strand = Plus / Plus
Query: 1 gtttttcagtctcttgtgaatctgtgagaggatcaggaggctcactcaaacgcagcgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtttttcagtctcttgtgaatctgtgagaggatcaggaggctcactcaaacgcagcgtct 260
Query: 61 gagtctacacaggctgagaggtagagaggctcggatggacacttttcaccatgactgcct 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 gagtctacacaggctgagaggtagagaggctcagatggacacttttcaccatgactgcct 320
Query: 121 cctcagtgggtttcccttcaagagggctgtggtgacagtgtttggttgcacagcaatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcagtgggtttcccttcaagagggctgtggtgacagtgtttggttgcacagcaatgat 380
Query: 181 tttagtggccactaaccacggtgactgcatcaatgactttgttggtagtggcaaaaagtg 240
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 tttagtggccactaaccacagtgactgcatcaacgactttgttggtagtggcaaaaagtg 440
Query: 241 atgtttaagctttatgtgcatttttattcacgaacgtgtgtgtg----tgtgtgtgtgtg 296
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 atgtttaagcttta-gtgcatttttattcacgaacgtgtgtgtgagtgtgtgtgtgtgtg 499
Query: 297 tgcgc 301
|||||
Sbjct: 500 tgcgc 504
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 700
Length adjustment: 9
Effective length of query: 292
Effective length of database: 691
Effective search space: 201772
Effective search space used: 201772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_g13.g1 MSMg01no138_g13.g1 CHROMAT_FILE:
MSMg01no138_g13.g1 PHD_FILE: MSMg01no138_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:26 2005
(310 letters)
>mm_chr9_46365878_46366588
Length = 711
Score = 497 bits (257), Expect = e-145
Identities = 298/315 (94%), Gaps = 9/315 (2%)
Strand = Plus / Minus
Query: 1 attctcgagtc-aaaataagcccaggagattttcttgtcatggggtgcatcctctgaggg 59
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 attctcaagtcaaaaataagcccaggagattttcttgtcatggggtgcatcctctgaggg 452
Query: 60 gtgggggtggggcagggagttctactgtagagtgcacagactgctgactgaatttgagaa 119
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 451 gtgggggtggggcagggagttctactgtagagtgcagagactgctgactgaatttgagga 392
Query: 120 aaagatgtgtcaccaagaattgctccccagagagcccctgcctcaggtagccaaagtctc 179
|| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 391 aacgatgtgtcaccaagaattgctccccagagagcccctgcctgaggtagccaaagtctc 332
Query: 180 ttaatcaccgagtacctgcgcacattcactgtccagctgtgtgtcccagctctcagcaaa 239
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ttaatcaccaagtacctgcgcacattcactgtccagctgtgtgtcccagctctcagcaaa 272
Query: 240 gcccatttacta---ttttccatttgcaagtctcaaatgcaacggct-ggcttcttcctc 295
|||||||||||| |||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 271 gcccatttactaaac----ccatttgcaagtctcaaatgcaaccgctgggcttcttcctc 216
Query: 296 cttacgaatcctcag 310
|||| ||||||||||
Sbjct: 215 cttaggaatcctcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 711
Length adjustment: 9
Effective length of query: 301
Effective length of database: 702
Effective search space: 211302
Effective search space used: 211302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
