CCTCACCANNNTCTCTATAATTGCGGCCGCTAAACGACTCCTATATTCAG
AAGATGCGCGGAATTCTTTGCCCTCTTCTGAACGCTGTAGGTATTGCGTG
TATCCCGCGCACGGAGCAAGTTTGTTTCTCCTGCCCTGTTAGCCAACATC
ATGAACTCCTGCAGTCTTTGACGAGATAAGCCGCCCTCCGGAGAGGCCCT
CATGGCATGGGACTGGGTGGCCTTTAGTCAATTGCTAGAGAGAAAATGAG
AACCTCTGTTGAAAGTCTTCAAGAAAGCAACTCCCAACAGCATCCTGTGA
GTCTGGAAAAGATTTCTTCCCTAGCTGGTCTTCCTTATCTCACTCATTGC
GGGTGGAGATTGTCCTAATATTGTTTCAGTTTCCCCTATCCGTATCCAGA
CAAAAAGCAACTTAAGGGAGAAAGGGTTTAATTTCTGCTCACAACTCTAG
GTTACATACCTTCCATCATTGTGGGGAAGGCAAGGCAGGAACTCAAAACT
GCTGGTCACAAACAGCCACATCCAAGAACAGAGAGAAATGAATGTGTGCT
TGCTTGCTTGTGCTTAGCTCAGTTTTCTACTCTCAAACAGTCCAGGATTG
CCTGCCTAGGGAATGGTGCCACCCACTGAGGGCTGGGTCTTTCCTCACCA
CTTAACTCTTTTGAAAGGTCCCCCATACACTTGCTCCCTGAT

CGACTCCCCNTCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACCTGAGCTGTGAA
ATGAGGAGAAGACTGAGCAATGGTAGTCTTTGGCGGTTAAAGCACAGCAG
AGCAAAAGGGGAAGCACTAAAAGGGGGGTTCTCAAAAGGGGAGCACACAA
AAAGAGAACCCTCAAAAGAGGAGCACTCAGAAGAGGAACACTCAAAAGGA
GGAGCACACAAAAGGAAGAGAGCTCAAATAGGGGAGCACTCAAATCACAG
CAGCTGCAGGTTCCTTAATCTTCCATCATCTGACGTTATCAAGGAGCTAA
AAAGTTTTCATAGTGAAAAAGTTTCAACAATAGCTGGCTTACTAGCTCTA
TGTGATTTTATTCCACCCTGAAAAATATGTCTTAAAATTAATATCCAGTG
CTGGTGTGTCAGCTCAGTCATCAGAGTGCTCGCTGGACGGCATTCAGTCT
TGAGTTATATACCTAGAGCAGGGCATGTGGTATGGGCCTGGAGGTAACAC
AGGAGGGTCCTTGGTGCTGACTGGCCAGACAATCTAGTCTGAGCCATGAG
CCTGGGTCTCAGTGAGAGAAACTGTCTCACAGAACATGGTGGATGACTCC
TAAGGAACAACACCCACATGTGATCGCTGACCGCCACATGCA

Query= MSMg01no138_n24.b1 MSMg01no138_n24.b1 CHROMAT_FILE:
MSMg01no138_n24.b1 PHD_FILE: MSMg01no138_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:03 2005
         (293 letters)



>mm_chr9_120500623_120501315
          Length = 693

 Score =  536 bits (277), Expect = e-157
 Identities = 289/293 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtattgcgtgtatcccgcgcacggagcaagtttgtttctcctgccctgttagccaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 201 aggtattgcgtgtatcccgcgcacggagcaagtttgtttctcctgctttgttagccaaca 260

                                                                       
Query: 61  tcatgaactcctgcagtctttgacgagataagccgccctccggagaggccctcatggcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatgaactcctgcagtctttgacgagataagccgccctccggagaggccctcatggcat 320

                                                                       
Query: 121 gggactgggtggcctttagtcaattgctagagagaaaatgagaacctctgttgaaagtct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggactgggtggcctttagtcaattgctagagagaaaatgagaacctctgttgaaagtct 380

                                                                       
Query: 181 tcaagaaagcaactcccaacagcatcctgtgagtctggaaaagatttcttccctagctgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaagaaagcaactcccaacagcatcctgtgagtctggaaaagatttcttccctagctgg 440

                                                                
Query: 241 tcttccttatctcactcattgcgggtggagattgtcctaatattgtttcagtt 293
           |||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttccctagctcactcattgcgggtggagattgtcctaatattgtttcagtt 493


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space:   194256
Effective search space used:   194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no138_n24.g1 MSMg01no138_n24.g1 CHROMAT_FILE:
MSMg01no138_n24.g1 PHD_FILE: MSMg01no138_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:03 2005
         (248 letters)



>mm_chr9_120675259_120675906
          Length = 648

 Score =  433 bits (224), Expect = e-126
 Identities = 242/248 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   acctgagctgtgaaatgaggagaagactgagcaatggtagtctttggcggttaaagcaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 448 acctgagctgtgaaatgaggagaagactgagcaatggtagtctttgggggttaaagcaca 389

                                                                       
Query: 61  gcagagcaaaaggggaagcactaaaaggggggttctcaaaaggggagcacacaaaaagag 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 388 gcagagcaaaaggggaagcactaaaaggggggttctcaaaaggggagcacgcaaaaggag 329

                                                                       
Query: 121 aaccctcaaaagaggagcactcagaagaggaacactcaaaaggaggagcacacaaaagga 180
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 328 aaccctcaaaagaggagcactcaaaagaggaacactcaaaaggaggagcacacaaaaggg 269

                                                                       
Query: 181 agagagctcaaataggggagcactcaaatcacagcagctgcaggttccttaatcttccat 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 268 agagagctcaaataggggagcactcaaatcacagcagctgcaggttccttgatcttccat 209

                   
Query: 241 catctgac 248
           ||||||||
Sbjct: 208 catctgac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space:   152721
Effective search space used:   152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)