CCTTTTTTTTTTTTNNTTTTTAGGTTAATTATATCTCACAATATTGTGTT
TATATATTTTTAAATATCGTTTATTTAAATAAAACACCCATATTCAGTTT
CCCCACTAGGCAGAGATGGGTGGGTCCAACTTCCTTTTTTACAACACACC
CTTCTTCAAACCGCGGCGGGCGGGCGCCTGTGTGGGTGTATTTGTATTTG
GCGCTTTTGAGGGCGGGTCCCTATTAAAACCGGGGGGGAGGTGGAGGAAG
AGGGGATGAGGTGGGAGGGGGGGAGGGGAAAATATGGGGGGTCTTGGGGT
CGAGCGGAGGATATACGGGTAAACAAAAACAGTGGGCCAATCGATTATGT
GTTGTGCGCCTCTGAAATGGGAACAGTGGAAGTTGGGAGTGGAAGGAGGG
TGGAGGGGGGAGGGAGTGGGTGGAAATGGCTCTGAGACTGTGGAATATTT
TTAGCTAGTTTTAAGTTGTAGCAAAATTGGGCATCGCGGTGAGCGTGACA
CGTGACACATATTCGACGAGTGGTCTTGGTGATTATTTGAAAACGAGCAA
CAATTAGTGATTGCACTTGCGTGACTACTCATTGTCCTGACAATTACCAA
CGGTTGTTTGATATTTAGATCGAACATTTGGGGCTAAAAGACGTGGGCCC
GGAGGGCCACATACCGGGCTTATGATTATTGCAGTGTGTTGTGCCAGTAC
AGCATGCCCCTGTATTGACGAGGATGGGGAGGCGGGGTGAGTATGTGGTT
GGAACCGATGTTTTGTGGCGCGCCGATGATGTTTCTTGCCGGCGCATGTT
GGTGCCCCCCCCGGTATTCATATATGTGGTGATTGGACCCGAGGTGTTTT
GCCATGACGTGAAAAGGGCGGCGTTGAAACGTGCCAACGTGTGTGTTAAC
GAACCCTGTCATACACGTTGCTGCGCGGGCACGCGGTACAAACACTGAGC
CCG

TTAAGCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCATCTTTAGGGGGTGGCTAGG
GCAAGGAGCCAGACAGAGACAGTGGAATTAGTGTAGGAGGTGTCTTGGAA
TCTAAAACAAAAAAACAAAACAGGCATATAATCAAACAAACAGAAGGAGA
GGAATCAGATGTACTGAAGGTGAGGATGGCAACTGAAATATATGCAGTTT
AAGTAGCCATGTGGAGGTTGCTGCTCATTATGTGTATATGTGTGTGTACA
CACATGCTTATGTATGGTGAGGCCAGAAGATTTCCAGCATCTTTTTCAAC
TGCTCTCCACCTGTGTTCTGAGACAAGGTCTCACATGAACCTGGAGCTCA
CTGAGTAGACAGCCTGGCTGTCCAGTGAACCCCGGTGACTAATCTGTCTC
CACTTTGGTGCTGGGATTGCAAGCCACTAAGACTGGCGTGTTTACATGTG
TTCTGGTGGGTCAGACTCCGCAGTCCCCACCCTTACACAGCACACATGTT
ATTGACCTAGGCATCTTCCAAGCCTCAGCCATCTCCCCAGGCTCTGTTGC
TCATTTTCAACCTGGAGAACTTCCAGGAAAGTTGTGGAGTCTGGCTGATG
TGGGAAGGAGGAAAATCACACAGTGAGTAACTGGACCAACTGCC

Query= MSMg01no139_c15.g1 MSMg01no139_c15.g1 CHROMAT_FILE:
MSMg01no139_c15.g1 PHD_FILE: MSMg01no139_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:28 2005
         (594 letters)



>mm_chr9_120137333_120138327
          Length = 995

 Score =  957 bits (495), Expect = 0.0
 Identities = 580/633 (91%), Gaps = 40/633 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcatctttagggggtggctagggcaaggagccagacagagacagtggaattagtgtagga 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 166 tcatctttagggggtggctagggcaaggagccagacagaggcagtggaattagtgtagga 225

                                                                       
Query: 61  ggtgtcttggaatctaaaa------------------------------------caaaa 84
           |||||||||||||||||||                                    |||||
Sbjct: 226 ggtgtcttggaatctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccaaaaaaccaaaa 285

                                                                       
Query: 85  aaacaaaacaggcatataatcaaacaaacagaaggagaggaatcagatgtactgaaggtg 144
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aaacaaaacaggcatataaccaaacaaacagaaggagaggaatcagatgtactgaaggtg 345

                                                                       
Query: 145 aggatggcaactgaaatatatgcagtttaagtagccatgtggaggttgctgctcattatg 204
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 346 aggatggcaactgaaatgtatgcagtttaagtagccatgtggaggttgctgctcattgtg 405

                                                                       
Query: 205 tgtatatgtgtgtgtacacacatgcttatgtatggtgaggccagaag---atttccagca 261
           |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||
Sbjct: 406 tgtatatgtgtgtgtacacacatgcttatgtatggtgaggccagaagttgatttccagca 465

                                                                       
Query: 262 tctttttcaactgctctccacctgtgttctgagacaaggtctcacatgaacctggagctc 321
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 466 tctttttcaactgctctccacctgtgttctgagacaaggtctcacatggacctggagctc 525

                                                                       
Query: 322 actgagtagacagcctggctgtccagtgaaccccggtgactaatctgtctccactttggt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 actgagtagacagcctggctgtccagtgaaccccggtgactaatctgtctccactttggt 585

                                                                       
Query: 382 gctgggattgcaagccactaagactggcgtgtttacatgtgttctggtgggtcagactcc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gctgggattgcaagccactaagactggcgtgtttacatgtgttctggtgggtcagactcc 645

                                                                       
Query: 442 gcagtccccacccttacacagcacacatgttattgacctaggcatcttccaagcctcagc 501
           ||||||||||||||||||||||||||| ||||||| || || ||||| ||||||||||||
Sbjct: 646 gcagtccccacccttacacagcacacacgttattggcccagacatctcccaagcctcagc 705

                                                                       
Query: 502 catctccccaggctctgttgctcattttcaacctggagaacttccaggaaagttgtggag 561
           |||||||||||||||||| |||||||| | |||||||||| |||||||||||||||||||
Sbjct: 706 catctccccaggctctgtcgctcattt-cgacctggagaagttccaggaaagttgtggag 764

                                            
Query: 562 tctggctgatgtgggaaggaggaaaatcacaca 594
           |||||||||||||||||||||||||||||||||
Sbjct: 765 tctggctgatgtgggaaggaggaaaatcacaca 797


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 995
Length adjustment: 10
Effective length of query: 584
Effective length of database: 985
Effective search space:   575240
Effective search space used:   575240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)