Query= MSMg01no140_l05.b1 MSMg01no140_l05.b1 CHROMAT_FILE:
MSMg01no140_l05.b1 PHD_FILE: MSMg01no140_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:30 2005
(596 letters)
>mm_chr9_61363036_61364031
Length = 996
Score = 1046 bits (541), Expect = 0.0
Identities = 565/573 (98%)
Strand = Plus / Minus
Query: 4 ggaattctcatagtgcctctggtagaagcatgtttcctctgtgccaggcctgggcctaaa 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ggaattctcatagtgtctctggtagaagcatgtttcctctgtgccaggcctgggcctaaa 717
Query: 64 atttcagggagcctcctcccgtggatcaatcagagtggaaacaggaggggtcctgctatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 716 atttcagggagcctcctcccgtggatcaatcagagtggaaacaggaggggtcctgctgtg 657
Query: 124 cctgcctctttcacatctcagaaccatcagtaccaccttctgggatgatggccgctgccc 183
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 cctgcctctttcgcatctcagaaccatcagtaccaccttctgggatgatggccgctgccc 597
Query: 184 ttgtgtgcatctgtatagatttctgtcatgggtcagttctctctctacataaaatgatgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ttgtgtgcatctgtatagatttctgtcatgggtcagttctctctctacataaaatgatgg 537
Query: 244 ccagctgcagcctacagttctgtccacagagggatctctcctcacagctagatttcagtt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ccagctgcagcctacagttctgtccacagagggatctctcctcacagctagatttcagtt 477
Query: 304 aagctgttgcacaatgacaagctattgtcagctgtgtctgtatcccaaactgacccatct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aagctgttgcacaatgacaagctattgtcagctgtgtctgtatcccaaactgacccatct 417
Query: 364 gtgaaccaaaatgacctgtcttcttctccctcagctgattctaagtactggtgatagagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtgaaccaaaatgacctgtcttcttctccctcagctgattctaagtactggtgatagagg 357
Query: 424 caagggccagcacgggatccctcacacggcagggagagaaatggcacccggggctcctgt 483
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 356 caagggccagcacgggatccctcacacggcagggagagaaatggcacctggggctcctgt 297
Query: 484 tcacgcagcttggctgtccaccatctagacctcgttctcctcttatgatgggctggggtg 543
||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 296 tcacgcagcttggttgtctgccatctggacctcgttctcctcttatgatgggctggggtg 237
Query: 544 tgtgccaccatgttcagttaaagctcagctact 576
|||||||||||||||||||||||||||||||||
Sbjct: 236 tgtgccaccatgttcagttaaagctcagctact 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_l05.g1 MSMg01no140_l05.g1 CHROMAT_FILE:
MSMg01no140_l05.g1 PHD_FILE: MSMg01no140_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:30 2005
(334 letters)
>mm_chr9_61231426_61232163
Length = 738
Score = 580 bits (300), Expect = e-170
Identities = 327/338 (96%), Gaps = 4/338 (1%)
Strand = Plus / Plus
Query: 1 tctggaaggctagagtggtgctttagagtcttaaaaatatgggtgt----accttctgtt 56
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tctggaaggctagagtggtgctttagagtcttaaaaatatgggtgtctgtaccttctgtt 260
Query: 57 cccaccagtgtgactctggacagcttcttgtcctttgtaaggttttgtgagtggtaggat 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccaccagtgtgactctggacagcttcttgtcctttgtaaggttttgtgagtggtaggat 320
Query: 117 gggtaatatgaccctacctgctagggtagccagagttttctaggattttcacagccgtgg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gggtaatatgaccctacctgctagggtagccagagttttctaggattttcacagctgtgg 380
Query: 177 aagtacagcccaacgtggtcggcattagctacgtggactattgaccaattgaaacgcgtg 236
||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 381 aagtacagcccaacgtggtcgacattagctacgtggactgctgaccaattgaaacgcgtg 440
Query: 237 gccctgtgttgtttgaagcactgagctttagaactgatgcaaatccagttgcacgaggtc 296
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccctgtggtggctgaagcactgagctttagaactgatgcaaatccagttgcacgaggtc 500
Query: 297 ctgtgtggcccctggctttctagacattgggggtttag 334
||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtgtggcccctggctttctagacattgggggtttag 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 738
Length adjustment: 9
Effective length of query: 325
Effective length of database: 729
Effective search space: 236925
Effective search space used: 236925
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
