Query= MSMg01no141_i15.b1 MSMg01no141_i15.b1 CHROMAT_FILE:
MSMg01no141_i15.b1 PHD_FILE: MSMg01no141_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:03 2005
(707 letters)
>mm_chr9_82213792_82214898
Length = 1107
Score = 1116 bits (577), Expect = 0.0
Identities = 610/621 (98%), Gaps = 1/621 (0%)
Strand = Plus / Plus
Query: 1 tatgtgatccttctaagttttgcaagtctcctgaattatgattttacagcagttggggta 60
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 201 tatgtgatccttctaagttttgcaagtctcatgaattatgattttacaggagttggggta 260
Query: 61 taatatcttaaatagactaaagtcatagcatacccaaagtctgtcatacattaaagcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatatcttaaatagactaaagtcatagcatacccaaagtctgtcatacattaaagcttt 320
Query: 121 gagctctgttttctggaaaatagtgacctcagacttaagcttcaacttctacctaccggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagctctgttttctggaaaatagtgacctcagacttaagcttcaacttctacctaccggt 380
Query: 181 gaagtttagctgaggaccacaagttctgaatatgctcacctataccttctctccagaaac 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagtttagctgaggaccacaagtcctgaatatgctcacctataccttctctccagaaac 440
Query: 241 taccctagacatccaccaccatatgtgtatcttaaggacatactataaaactttgtgtta 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taccctagacatccatcaccatatgtgtatcttaaggacatactataaaactttgtgtta 500
Query: 301 tgccaaactggaaaatcttttagaaatggatttatttctagacacatgaatcctaccaaa 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgccaaactggaaaatctaaaagaaatggatttatttctagacacatgaatcctaccaaa 560
Query: 361 gtaaaattaagatggaataaatttatacaaaaacatcagatagaagaagaaattaaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaaaattaagatggaataaatttatacaaaaacatcagatagaagaagaaattaaaaat 620
Query: 421 ctcttacaaacaaaacaaacaacaaaataaggccagatagatccagatagagctctaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcttacaaacaaaacaaacaacaaaataaggccagatagatccagatagagctctaatc 680
Query: 481 aactgttaaagaaaaatgaaaatcaatattccttgaagcactacataaaatagcaaggga 540
| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 agctgttaaagaagaatgaaaatcaatattccttgaagcattacataaaatagcaaggga 740
Query: 541 atgaatattcaacattcttttgcaaagtcaaactacgcacaaatcaaatgaacaaataaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgaatattcaacattcttttgcaaagtcaaactacgcacaaatcaaatgaacaaataaa 800
Query: 601 agagagagagagagagagaga 621
|||||||||||||||| ||||
Sbjct: 801 agagagagagagagag-gaga 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 707
Length of database: 1107
Length adjustment: 10
Effective length of query: 697
Effective length of database: 1097
Effective search space: 764609
Effective search space used: 764609
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no141_i15.g1 MSMg01no141_i15.g1 CHROMAT_FILE:
MSMg01no141_i15.g1 PHD_FILE: MSMg01no141_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:03 2005
(729 letters)
>mm_chr5_90672782_90673910
Length = 1129
Score = 990 bits (512), Expect = 0.0
Identities = 533/540 (98%)
Strand = Plus / Plus
Query: 1 actgctattctgattgctatggcgaggccccttgtgaggcttaggcgccctagtagctct 60
|||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 201 actgctattctgattgctatggcgaggcaccatgtgaggcttaggcgagttagtagctct 260
Query: 61 ggcagggctcaaaggcctgacaggaaaaggaccccaagtggactgagctggtgggaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcagggctcaaaggcctgacaggaaaaggaccccaagtggactgagctggtgggaaagt 320
Query: 121 acctccaaagtgggtcatgggcaaccgtggtggacggatctgctggaaagtctgagcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctccaaagtgggtcatgggcaaccgtggtggacggatctgctggaaagtctgagcagc 380
Query: 181 aagcaaagcgtgtgcaaactgtggaggaggatatgctaatggaagagaaactggaaaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagcaaagcgtgtgcaaactgtggaggaggatatgctaatggaagagaaactggaaaccc 440
Query: 241 aggcctcacattattcacagggttcttaatggttttgtgagtggatgcagaagagatggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggcctcacattattcacagggttcttaatggttttgtgagtggatgcagaagagatggc 500
Query: 301 aggaacggtgagtgcagtggctttctgagatgtcgacgacagagctacagttgtcatttt 360
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggaacggtgagtgcagtggcagtctgagatgtcgacgacagagctacagttgtcatttt 560
Query: 361 gatccccattaaggaactgttagcagcagtggtggtaggtgctgaggacccgattttgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatccccattaaggaactgttagcagcagtggtggtaggtgctgaggacccgattttgga 620
Query: 421 atttgctgtggagcttttcaaacgattctttggaataagttcatcaatttctttgtctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttgctgtggagcttttcaaacgattctttggaataagttcatcaatttctttgtctgg 680
Query: 481 atccttgatcaaagcattgatcaactgagttgcttgtcttgttgattcagtgccacccct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atccttgatcaaagcattgatcaactgagttgcttgtcttgttgattcagtgccacccct 740
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 729
Length of database: 1129
Length adjustment: 10
Effective length of query: 719
Effective length of database: 1119
Effective search space: 804561
Effective search space used: 804561
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
