Query= MSMg01no143_p15.b1 MSMg01no143_p15.b1 CHROMAT_FILE:
MSMg01no143_p15.b1 PHD_FILE: MSMg01no143_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:40 2005
(323 letters)
>mm_chr9_95818687_95819408
Length = 722
Score = 609 bits (315), Expect = e-179
Identities = 321/323 (99%), Gaps = 1/323 (0%)
Strand = Plus / Minus
Query: 1 ggcttatacccaatattcaaattatatatatataaaatgatgactccttatctaataaca 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 ggcttatacccaatattcaaattatatatatataaaatgatgattccttatctaataaca 382
Query: 61 tcacataaaggtagttgtatacccatattattaaaacacaaacaacactgaaaaaaaaac 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 tcacataaaggtagttgtatacccatattattaaaacacaaacaacactg-aaaaaaaac 323
Query: 121 gaacaaagtagcaaggctagattaggaccaatatccttaagtgtcctcctcgtcttttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaacaaagtagcaaggctagattaggaccaatatccttaagtgtcctcctcgtcttttta 263
Query: 181 tagcaaaaatcacaaaatatgacaaataacttaataacatttagttttaaagatctacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tagcaaaaatcacaaaatatgacaaataacttaataacatttagttttaaagatctacaa 203
Query: 241 atggggctgggattaagcccaattggtagagtatttgtgtagcatgcacaagaccctagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 atggggctgggattaagcccaattggtagagtatttgtgtagcatgcacaagaccctagg 143
Query: 301 ttcatatagacccattgtggtgc 323
|||||||||||||||||||||||
Sbjct: 142 ttcatatagacccattgtggtgc 120
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 722
Length adjustment: 9
Effective length of query: 314
Effective length of database: 713
Effective search space: 223882
Effective search space used: 223882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_p15.g1 MSMg01no143_p15.g1 CHROMAT_FILE:
MSMg01no143_p15.g1 PHD_FILE: MSMg01no143_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:40 2005
(628 letters)
>mm_chr9_95656624_95657652
Length = 1029
Score = 1170 bits (605), Expect = 0.0
Identities = 623/629 (99%), Gaps = 1/629 (0%)
Strand = Plus / Plus
Query: 1 agctttcagaaatcaacaacttttttctgaatgtgaatgaggagatgagcactctttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctttcagaaatcaacaacttttttctgaatgtgaatgaggagatgagcactctttcat 260
Query: 61 aatcagcaacacaaccaagaagagcagcagctttggggtaaaggtggcatgttggatacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatcagcaacacaaccaagaagagcagcagctttggggtaaaggtggcatgttggatacc 320
Query: 121 aacacagtagtgagtgtggagggaaagcgctggctcaaatggttctgaagccgacgggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacacagtagtgagtgtggagggaaagcgctggctcaaatggttctgaagccgacgggac 380
Query: 181 ctctgcacttccgttattgtaattagtacccttctctttaacttaagccaatttacattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctgcacttccgttattgtaattagtacccttctctttaacttaagccaatttacattc 440
Query: 241 ttaccatggaagccaggaacacgtttttacctaaactcggggatgggaacgccacaggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaccatggaagccaggaacacgtttttacctaaactcggggatgggaacgccacaggat 500
Query: 301 tcttgatttttacttgagtataatgaaagtacaaataccgcccctggccaaatacagctt 360
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 501 tcttgatttttacttgagtataatgaaagtacaaatacagtttctggccaaatacagctt 560
Query: 361 cataataaatgaccgaaaataatttgaagaatgttttgtgacatttgagaagccaaaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cataataaatgaccgaaaataatttgaagaatgttttgtgacatttgagaagccaaaaac 620
Query: 421 ttagtttatttattctagaagaaaacaggttttgggatacaaatgggagattaaaaaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttagtttatttattctagaagaaaacaggttttgggatacaaatgggagattaaaaaaaa 680
Query: 481 aaaa-ttaagcctctcacatctaaatgatgctggtacttggcgtgtagtatccttcctga 539
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaaaattaagcctctcacatctaaatgatgctggtacttggcgtgtagtatccttcctga 740
Query: 540 ttctgaaaagcaacccattccctttttctctgtgtgtactctgcagaccacctgtctgga 599
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 741 ttctgaaaagcaacccattccctttttctctgtgtgtactctgcagactacctgtctgga 800
Query: 600 aatcagctggagtgctggctagcaccgag 628
|||||||||||||||||||||||||||||
Sbjct: 801 aatcagctggagtgctggctagcaccgag 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1029
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1019
Effective search space: 629742
Effective search space used: 629742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
