MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-144C02
Chromosome	9 (Build37)
Map Location	22,889,741 - 22,890,280
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ecsit, EG625409, Cnn1, Elof1, Acp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092, Zfp810, LOC100041826, EG625603, Anln, 9530077C05Rik, rp9, LOC100041870, Bbs9, LOC100040805
Downstream gene	Bmper, LOC100040866, LOC100040878, LOC100040893
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ecsit (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26940 MGI:1349469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625409 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625409 MGI:3648298
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 73 ESTs, 3 Proteins pseudo : _no_value

name	Cnn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12797 MGI:104979
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Elof1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66126 MGI:1913376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11433 MGI:87883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pigyl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66268 MGI:1913518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100034724 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100034724
definition	note : ribosomal protein L15 pseudogene pseudo : _no_value

name	9530015I07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619310 MGI:3588272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810064F22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69862 MGI:1917112
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp809 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235047 MGI:2143362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC050092 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235048 MGI:2679006
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp810 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235050 MGI:2384563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041826 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 836 ESTs, 11 Proteins

name	EG625603 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625603 MGI:3645371
definition	note : predicted gene, EG625603 pseudo : _no_value

name	Anln (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68743 MGI:1920174
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9530077C05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68283 MGI:1915533
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	rp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55934 MGI:2157166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041870 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041870
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Bbs9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319845 MGI:2442833
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040805 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 12 Proteins pseudo : _no_value

name	Bmper (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73230 MGI:1920480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040866 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100040878 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC100040893 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ecsit (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755521 GeneID:26940 MGI:1349469
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ECSIT homolog (Drosophila) transcript_id : NM_012029.1

name	Cnn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347862 GeneID:12797 MGI:104979
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calponin 1 transcript_id : NM_009922.3

name	Elof1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254323 GeneID:66126 MGI:1913376
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elongation factor 1 homolog (ELF1, S. cerevisiae) transcript_id : NM_170777.3

name	Acp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131000 GeneID:11433 MGI:87883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acid phosphatase 5, tartrate resistant transcript_id : NM_007388.2

name	Pigyl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126722948 GeneID:66268 MGI:1913518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol glycan anchor biosynthesis, class Y-like transcript_id : NM_001082532.1

name	9530015I07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386406 GeneID:619310 MGI:3588272
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9530015I07 gene transcript_id : NM_001033813.2

name	1810064F22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369702 GeneID:69862 MGI:1917112
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810064F22 gene transcript_id : NM_001033151.2

name	Zfp809 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70778878 GeneID:235047 MGI:2143362
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 809 transcript_id : NM_172763.2

name	BC050092 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340882 GeneID:235048 MGI:2679006
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC050092 transcript_id : NM_181419.2

name	Zfp810 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130189 GeneID:235050 MGI:2384563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 810 transcript_id : NM_145612.2

name	LOC100041826 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259880 GeneID:100041826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 836 ESTs, 11 Proteins product : similar to high mobility group nucleosomal binding domain 2 transcript_id : XM_001477164.1

name	Anln (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380043 GeneID:68743 MGI:1920174
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : anillin, actin binding protein (scraps homolog, Drosophila) transcript_id : NM_028390.2

name	9530077C05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46810272 GeneID:68283 MGI:1915533
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9530077C05 gene transcript_id : NM_026739.1

name	rp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9055299 GeneID:55934 MGI:2157166
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinitis pigmentosa 9 (human) transcript_id : NM_018739.1

name	LOC100041870 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259882 GeneID:100041870
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100041870 transcript_id : XM_001477212.1

name	Bbs9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37620184 GeneID:319845 MGI:2442833
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bardet-Biedl syndrome 9 transcript_id : NM_181316.3

name	Bmper (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24371215 GeneID:73230 MGI:1920480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BMP-binding endothelial regulator transcript_id : NM_028472.1

name	Cnn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560611 CCDS:CCDS22921.1 GeneID:12797 MGI:104979
definition	GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA] GO_process : GO:0031032 - actomyosin structure organization and biogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : calponin h1 product : calponin 1 protein_id : NP_034052.2

name	Elof1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25140989 GeneID:66126 MGI:1913376
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : elongation factor 1 homolog (ELF1, S. cerevisiae) protein_id : NP_740747.1

name	Acp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680624 CCDS:CCDS22923.1 GeneID:11433 MGI:87883
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0003993 - acid phosphatase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : acid phosphatase type V product : acid phosphatase 5, tartrate resistant protein_id : NP_031414.1

name	Pigyl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126722949 GeneID:66268 MGI:1913518
definition	codon_start : 1 note : phosphatidylinositol N-acetylglucosaminyltransferase subunit Y product : phosphatidylinositol glycan anchor biosynthesis, class Y-like protein_id : NP_001076001.1

name	9530015I07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702145 GeneID:619310 MGI:3588272
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC619310 protein_id : NP_001028985.1

name	1810064F22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701662 GeneID:69862 MGI:1917112
definition	GO_component : GO:0019028 - viral capsid [Evidence IEA] GO_function : GO:0005198 - structural molecule activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC69862 protein_id : NP_001028323.1

name	Zfp809 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70778879 GeneID:235047 MGI:2143362
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation product : zinc finger protein 809 protein_id : NP_766351.2

name	BC050092 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088880 GeneID:235048 MGI:2679006
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC235048 protein_id : NP_852084.1

name	Zfp810 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704232 GeneID:235050 MGI:2384563
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein ZFP protein_id : NP_663587.1

name	LOC100041826 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259881 GeneID:100041826
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477214.1

name	Anln (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22507319 CCDS:CCDS22927.1 GeneID:68743 MGI:1920174
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence ISS]; GO:0005826 - contractile ring [Evidence ISS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence ISS] [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0000910 - cytokinesis [Evidence ISS]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : anillin protein_id : NP_082666.1

name	9530077C05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46810273 GeneID:68283 MGI:1915533
definition	codon_start : 1 product : hypothetical protein LOC68283 protein_id : NP_081015.1

name	rp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055300 GeneID:55934 MGI:2157166
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005785 - signal recognition particle receptor complex [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : Pim-1 associated protein product : retinitis pigmentosa 9 homolog protein_id : NP_061209.1

name	LOC100041870 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259883 GeneID:100041870
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477262.1

name	Bbs9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37620185 CCDS:CCDS22928.1 GeneID:319845 MGI:2442833
definition	codon_start : 1 note : EST 3159894; parathyroid hormone-responsive B1 product : Bardet-Biedl syndrome 9 protein_id : NP_851833.2

name	Bmper (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24371216 CCDS:CCDS22929.1 GeneID:73230 MGI:1920480
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030514 - negative regulation of BMP signaling pathway [Evidence IDA] codon_start : 1 note : crossveinless-2; crossveinless 2 homolog product : crossveinless 2 protein_id : NP_082748.1

name	LOC100040866 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040866
definition	number : 1 pseudo : _no_value

name	LOC100040866 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040866
definition	number : 2 pseudo : _no_value

name	LOC100040866 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040866
definition	number : 3 pseudo : _no_value

name	LOC100040878 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040878
definition	number : 1 pseudo : _no_value

name	LOC100040893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040893
definition	number : 1 pseudo : _no_value

name	LOC100040893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040893
definition	number : 2 pseudo : _no_value

name	LOC100040893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040893
definition	number : 3 pseudo : _no_value

name	LOC100040893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040893
definition	number : 4 pseudo : _no_value

name	LOC100040893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040893
definition	number : 5 pseudo : _no_value

name	EG625409 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149259877 GeneID:625409 MGI:3648298
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 73 ESTs, 3 Proteins product : predicted gene, EG625409 pseudo : _no_value transcript_id : XR_001828.2

name	LOC100040805 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259845 GeneID:100040805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 12 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_032174.1

clone name	MSMg01-401F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489N03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-056F01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-498J01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-149L16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-499I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391D09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-426I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073P03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-144C02.T7 (MSMg01no144_c02.b1)	MSMg01-144C02.TJ (MSMg01no144_c02.g1)
ACC	AG348284	AG348285
length	729	1,064
length of high quality (start - end)	543 (46 - 588)	---
definition	CHROMAT_FILE: MSMg01no144_c02.b1 PHD_FILE: MSMg01no144_c02.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:04:52 2005	CHROMAT_FILE: MSMg01no144_c02.g1 PHD_FILE: MSMg01no144_c02.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:04:52 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAGAGAGCGCGGA ATTCAAACTCATGTACCTATGGAGGCCATTTCTAGTCAAACCACCACAGT AGTCTAGGATGGGTTAAAGCACACAGGAGGATGTGTGTAGCTACATGGTC CTGAAGCTCTGCGGGTCTTAGTATCCTGGAACTAAAGCTTGGCAGACTCT AAGTGGAGACTACCCTCAGTTTTACTGAGATTTCCTTTGTCTTTTCTGTC ATGGACTCTCTTTTCCTTTGTGACCTCAAGGCCATCACTGACACATCATT CCAGGAGAGATTATCACAGTAGGCATGCCTCTTCTGTGGTTAAGGAAGCT GTCACATGCCACTCGGGTTATGTAGGTAGAATGGTAAGTTAGTCCTTAAC AAATGAGGTAGGCTCTAACACACTTGGGAGAACTGACTTGGGCTTATGGT TTTGTGTTGCTGGCTTGTATTTGCAGTGTCAGGGTCACAGTTTGTGTTGC CGTTGCTCTGCCAGCTAGCTGAGAAGCAATCCAGCTCTAGCTTGGTTGTT CTAGAAACTACCCTGATTAGGTCTTAGGAATTTTTTTAGCTTGCAAGCTA ATTCTTAGGTTGCAACTGGCCTCACAGTTCAATGACCTGCAGCCACCAGG CAATGCCTGAATGGTGCAGCCATGCCCAATTGCCATGTATTCCTACATGA TTCTTCTAGGCTTCAGTTACTCTCTTTCG	AATACTTTATCATCCCGATTAATTATACCCTGACAACACCACACTCTACT ACTCGCCGGCTAACTAGCGCAACCGCGCGAAATCGCGCCTTTTCGGCAGC ACAATATAACTGGATCGCGCGTTCGCAATAAAACTGTAGACAGAGTCAAT TTTATAGCTACACATACCTGCACTCTCGTTAACGGTGCGTGTTCTTCCCT TTCATGAACTAACTAACCGCGCCCAATTTGAGCGAAGAACTAACACGCAA GCGGTGTAAAAGATAAGCGCACACGGGGGTCAACTGTTTCACAATCTTTA AAAAATATCCGACAAGTCACACTCCGAGCTCCATCGGTTCGTTCTGATGG CATTTGTGCGACCACGTTTAATCGCCCCCAAATGCAACCAGACTATGTTT GCCATTAACGTATCTCGATGGAGCGCGGGCCGCCCCCGTTTTACGTGGGC GTCTTTCTTCCCCCAAAAAAAAAAAAATATGGCGAGTGCCCGGGGTAACA ACCTTTCCAATTTGAGAGAACACATGGGATAAATTCGCCTCGTCCCGGGT CGGGAAAAAAACTTTTAACCTCTTGCGGGTGCCTCCCCATCTTTTGGTGC CCCCAATAGCCTCTTTAAACCACTTAAAGACACACGTTTACCACACGTGG TNTTTTACGCGCCCCCACCGGCGGGGATTTTCTTTAAAATCCAAGATGAA CTCACCTCTACAATAACAAAAGTTTGGTGTATAAAAGGTGAGTGTTAACC AACTAAAACGTATCAAATTGGGGTGCTATGCGGTCAAAAATAACGCTTAT ATTGCGGTGGTTATACACATTTTGTCCGCGAATAGACTAAACTCTCCCGC GTTGACGCCAGCGTGTTTTTCCATATTTTCTGCGACAAGTCGCGCACCCA CAACCCGACCGAGAAATAGACATTTACGCCTTATCCACCCTCTTCTCCCG GCTTGTTTCCCCACCTCGTATCCAACACCTGTGGTTGTGGTCGTACCGAT CATCACTCATACGCACCCCGATTACAATTGTTGCGAGTATTTATACCCAC CCCTCTCTCGCCCG
quality values	Open. Hide. 6 6 6 6 6 6 14 19 41 43 39 39 39 37 23 27 16 3 0 3 13 21 28 59 28 28 24 22 20 19 19 9 9 9 9 9 9 6 8 8 8 6 6 8 11 17 21 30 33 33 33 31 44 53 53 44 31 33 33 22 21 8 8 8 8 8 8 16 25 39 37 39 39 41 33 33 33 36 36 36 57 57 57 57 53 50 50 50 43 44 43 48 47 47 42 42 39 42 48 48 59 46 43 43 46 48 48 50 50 50 48 54 59 59 59 59 59 59 57 57 57 57 57 43 41 41 47 47 41 41 42 48 46 46 57 57 57 57 57 57 47 43 36 28 28 38 40 57 43 43 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 54 59 59 59 52 52 52 57 57 57 57 59 59 57 57 57 57 57 57 59 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 68 68 59 57 57 57 57 57 57 68 68 68 68 68 59 57 57 57 57 57 57 57 57 59 59 57 57 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 62 62 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 68 68 68 68 68 68 62 62 44 38 26 27 27 31 43 43 62 62 62 52 52 62 62 43 43 43 43 59 57 59 59 59 59 59 59 59 57 59 57 35 35 39 57 57 59 52 52 52 57 57 57 38 41 20 20 20 38 38 43 35 39 39 43 57 52 52 52 59 59 57 57 57 57 57 57 52 54 52 59 52 54 54 59 59 59 52 52 52 52 52 52 59 59 54 54 52 57 52 52 52 43 43 43 43 35 35 35 44 44 48 48 57 59 59 50 59 59 48 42 46 46 48 57 48 57 44 59 54 48 48 44 57 57 57 47 46 43 43 43 59 59 57 59 59 57 57 57 57 54 54 57 59 44 24 18 9 9 9 23 23 54 54 48 48 48 48 48 59 59 43 36 36 43 43 43 40 39 35 35 47 59 59 48 37 37 32 35 32 37 37 43 32 34 34 41 34 34 33 31 32 28 25 25 25 34 34 39 37 37 30 39 39 43 43 57 57 48 48 48 48 48 48 48 48 47 47 41 41 37 34 33 24 24 30 30 36 39 39 41 41 39 39 39 37 36 40 39 39 39 39 35 35 35 37 28 28 12 12 11 12 12 30 27 14 10 9 13 15 20 33 33 37 37 32 26 16 10 10 12 12 23 12 13 13 28 30 40 43 40 31 31 21 16 16 15 25 32 22 19 24 20 20 20 28 30 18 14 14 10 21 10 11 11 16 20 26 29 19 19 19 10 13 8 8 8 8 11 10 11 13 11 11 11 11 12 12 11 15 15 19 24 32 37 39 37 34 20 13 10 10 12 14 16 9 11 11 11 13 10 10 10 8 8 8 8 8 8 8 9 10 11 10 9 9 8 8 10 11 24 24 15 12 12 12 11 8 11 8 8 8 15 15 18 17 17 18 19 16 9 9 9 14 14 17 19 19 9 8 8 8 8 10 13 11 8 8 8	Open. Hide. 11 11 11 11 11 8 8 8 8 8 8 11 18 13 9 9 6 6 8 6 8 8 8 8 7 6 8 8 8 8 8 8 8 8 10 10 17 16 10 10 8 8 8 8 9 9 10 11 11 11 12 12 10 10 10 10 10 10 11 10 11 11 11 11 11 8 8 8 6 6 6 6 6 8 8 8 8 10 8 8 8 6 6 10 8 10 10 10 12 10 8 8 8 8 7 6 6 6 6 6 8 6 8 8 8 10 10 10 10 9 9 9 9 8 8 9 9 9 9 9 8 8 8 7 6 8 8 8 8 8 10 10 11 9 8 8 8 8 8 6 6 8 8 14 9 9 9 9 9 9 12 12 12 11 8 8 8 8 8 8 8 8 8 8 8 8 8 10 9 9 9 9 9 10 10 8 8 6 6 8 8 8 8 8 8 8 6 6 7 6 10 9 11 10 10 8 8 8 8 9 16 12 12 12 11 11 12 11 11 8 8 8 8 8 8 9 9 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 6 6 8 8 8 8 8 9 9 9 9 11 11 11 10 10 16 13 12 12 12 10 10 10 10 10 8 9 8 6 6 6 8 8 10 8 8 6 6 8 8 8 8 8 8 6 6 8 8 8 8 10 12 12 8 8 8 6 6 8 12 10 12 10 10 10 10 13 10 6 6 6 6 8 8 8 8 10 6 6 8 8 9 8 8 8 9 8 8 8 8 8 8 8 8 8 8 11 12 12 12 10 10 9 6 10 8 14 8 8 8 8 8 8 8 8 9 9 10 8 8 8 9 9 9 9 9 9 9 11 8 8 8 8 8 8 10 10 10 10 10 11 11 8 8 6 6 8 8 11 10 13 10 10 10 8 8 8 8 8 8 6 6 6 6 11 8 8 9 9 9 9 10 11 11 9 9 9 9 12 11 12 9 9 9 9 9 9 9 8 6 8 7 6 6 6 8 6 6 6 6 8 8 8 8 10 8 13 10 12 8 8 8 8 8 8 10 9 10 10 11 10 10 6 6 6 6 8 8 15 11 11 16 16 12 15 16 16 15 11 9 9 8 8 8 8 8 8 8 8 6 6 10 10 6 6 6 6 6 8 9 10 8 8 8 8 8 8 9 10 9 10 8 8 6 9 10 12 15 17 10 10 10 11 9 8 8 8 8 8 8 8 8 12 8 8 6 6 8 7 7 8 6 6 8 8 8 8 8 8 9 12 12 8 6 6 6 6 6 6 6 6 10 8 18 23 19 16 10 10 8 8 8 8 8 8 8 10 8 8 8 8 8 13 8 8 10 10 10 13 8 8 8 8 9 11 11 11 17 15 12 12 15 11 11 11 10 9 8 8 6 6 8 8 9 10 11 8 10 10 13 13 8 9 9 10 10 10 10 10 9 10 8 8 8 10 9 8 8 6 6 10 8 8 8 10 8 8 6 6 8 8 8 8 8 10 10 3 0 3 10 13 13 10 10 10 10 12 12 14 12 9 10 7 7 6 6 8 8 8 8 8 10 10 12 10 10 10 13 13 14 14 10 15 11 13 8 8 6 6 8 6 8 9 9 8 8 8 8 8 9 10 11 9 9 8 8 8 8 8 8 8 8 8 8 15 10 9 11 8 10 10 12 10 7 6 8 8 8 8 8 16 8 8 8 8 8 8 8 8 10 8 9 9 10 9 10 10 9 9 10 10 9 11 9 7 10 8 7 6 8 6 9 9 10 12 9 10 10 12 8 8 6 8 6 9 6 7 8 8 8 8 8 8 13 14 8 8 8 8 8 8 9 8 11 8 8 8 8 6 8 6 6 6 8 8 6 6 8 8 13 13 10 8 8 8 8 8 8 8 8 8 10 6 6 6 6 8 8 9 9 9 6 6 6 7 8 8 8 8 8 8 8 8 8 8 11 8 8 9 8 6 8 8 8 8 8 10 10 8 6 6 8 8 13 15 11 12 11 8 8 12 10 8 8 10 9 8 8 8 8 9 8 8 8 8 8 6 6 9 8 8 8 8 10 8 13 12 9 9 7 7 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 10 6 6 6 8 8 8 10 6 6 6 6 8 6 10 12 8 10 10 10 8 8 6 6 6 8 8 11 13 14 8 10 10 8 8 10 11 8 8 8 8 8 8 8 9 12 12 8 8 6 6 8 8 11 10 12 8 8 8 8 8 8 10 12 11 10 8 10 8 6 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 10 6 6 8 8 15 10 10 10 12 8 8 8 8 8 8 6 6 8 8 8 6 6 8 6 9 8 8 8 8 10 8 10 11 11 12 14 14 11 12 15 15 18 11 11 8 8 8 8 12 11 11 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no144_c02.b1 MSMg01no144_c02.b1 CHROMAT_FILE:
MSMg01no144_c02.b1 PHD_FILE: MSMg01no144_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:52 2005
         (543 letters)



>mm_chr9_22889538_22890480
          Length = 943

 Score =  940 bits (486), Expect = 0.0
 Identities = 527/542 (97%), Gaps = 4/542 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattcaaactcatg--tacctatggaggccatttctagtcaaaccaccacagtagtcta 61
           |||||||||||||||  |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaaactcatgagt--ctatggaggccatttctagtcaaaccaccacagtagtcta 261

                                                                       
Query: 62  ggatgggttaaagcacacaggaggatgtgtgtagctacatggtcctgaagctctgcgggt 121
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 262 ggatgggttaaagcacacaggaggatgtgtgtagctacatggtcctgaagctcttcgggt 321

                                                                       
Query: 122 cttagtatcctggaactaaagcttggcagactctaagtggagactaccctcagttttact 181
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 322 cttagtatcctggaactaaagcttggcagattctaagtggagactaccctcagttttact 381

                                                                       
Query: 182 gagatttcctttgtcttttctgtcatggactctcttttcctttgtgacctcaaggccatc 241
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 382 gagatttcctttgtcttttctgtcatggactctctttttctttgtgacctcaaggccatc 441

                                                                       
Query: 242 actgacacatcattccaggagagattatcacagtaggcatgcctcttctgtggttaagga 301
           |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 442 actgacacgtcattccaggagagattatcatagtaggcatgcctcttctgcggttaagga 501

                                                                       
Query: 302 agctgtcacatgccactcgggttatgtaggtagaatggtaagttagtccttaacaaatga 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agctgtcacatgccactcgggttatgtaggtagaatggtaagttagtccttaacaaatga 561

                                                                       
Query: 362 ggtaggctctaacacacttgggagaactgacttgggcttatggttttgtgttgctggctt 421
           |||||||||| ||||||||||||||| ||| ||||||||||||| |||||||||||||||
Sbjct: 562 ggtaggctctgacacacttgggagaattgatttgggcttatggtattgtgttgctggctt 621

                                                                       
Query: 422 gtatttgcagtgtcagggtcacagtttgtgttgccgttgctctgccagctagctgagaag 481
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gtgtttgcagtgtcagggtcacagtttgtgttgccgttgctctgccagctagctgagaag 681

                                                                       
Query: 482 caatccagctctagcttggttgttctagaaactaccctgattaggtcttaggaatttttt 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 caatccagctctagcttggttgttctagaaactaccctgattaggtcttaggaatttttt 741

             
Query: 542 ta 543
           ||
Sbjct: 742 ta 743


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information