CTCCTTCTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTAGTCAGGTCCTTTTCTTCTTTTTTTATTTTTTTTATTTT
TTATTTTTTTTGGTTTTTTGAGACAGGGTTTCTCTGTATAGCTCTGGCTG
TCTTGGAACTAACTAACTCTGTAGTCCAGCCTGGCCTCGAACTCAGAAAT
CCGCCTGCCTCTGCCTCCCGAGTGCTGGGACTAAAGGTGTTCGGCACCAC
GGCCAGTGGGTCCTTTTCTTCTTAGATTCGCCTTTGATAAACTCGCTGTG
AATCCGATGGCTGTTTTGTATTGAACTTGTTCATATATATTGGTTTGTTT
TGTAACTGTTATGGCCATTTTCTACATGTCCAGTTTTTCAAATAAAATCT
TTTTTAAAAACAATGTGTATAAATACTATGCCTTTGTGTATGTACATGTA
CCACATGTGTGCCTAGTATCCTTTGAGGTCAGAAGAGGGTGTCAGATCTC
CTAGAATTAGTTATTAGTGGTTGTGAGCCACCATTCCGGTACTGAGAACC
AAACCCAGGCCCTCTGCAAGAACAAGTGTTTTTAATCTCTTAGCTAACTC
TCCAGCCCTAGTTTTGAGGGCTATCTTAGTCAGGGTTTCTATTCCTGCAC
AAACATCATGACCAAGACGCAAGATGGGGAGGAAAGGTTTTATT

NTTTTNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTAAGATTGTAAAAGCTA
AGTCACTCCCTTACACAGGAATTTACCATCACTAAGGAAGAAGGAAGTTT
CAGACCAAAGGAGAAATCAGAATAGATACTTAGAACTGTAGCAGAGTTAC
ACCCATACACATGTATTTACAATGGCCTAAGGGGAAGGTGGCCTATACAA
GAGACTAAAATAGGAACTATGGCAAGGGTGCGAAGCCCTTGACCCTGGCT
TCTAAGATTAGTGAATCTTAGGTGGAGCCCTTGTTGATCCCAGCTGTTGT
CAATGAATTCTATCCCAGGTGGTTCCCGTTAGACCTTTTGTGTTTGCATT
CCTCTGTTTTATGTAAGATTCCGGTTACCTCAATTGTACCTTGTGAATAT
GTCACCTAACTTCCTTATTGTCCTCTGCATAAAAAGTCTGATGCTCGATT
TTAAAATTACACTCAGATTCCACACGAACTTTCCTGTGTGTGTCTGTTTG
TCGCTCATCCACGCTTTGCCCACCCGCGTCGAGAGACCCCATTCCACGCA
GACACAGGGACCCAGAGAGTCTGCGGCAGCTGGCGCCCGAACAGGGACAC
CAGAGCGGGTTAGTCTTTAGNTCTTCTTCTTTCTTTTTTCTTTTTCA

Query= MSMg01no145_a01.b1 MSMg01no145_a01.b1 CHROMAT_FILE:
MSMg01no145_a01.b1 PHD_FILE: MSMg01no145_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:58 2005
         (626 letters)



>mm_chr9_122927289_122928314
          Length = 1026

 Score = 1116 bits (577), Expect = 0.0
 Identities = 613/627 (97%), Gaps = 6/627 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctagtcaggtccttttcttctttttttat----ttt-ttttattttttatttttt 59
           ||||||||||||||||||||||||||||||||||    ||| ||||||||||| ||||||
Sbjct: 201 gaattctagtcaggtccttttcttctttttttatttactttattttatttttt-tttttt 259

                                                                       
Query: 60  ttggttttttgagacagggtttctctgtatagctctggctgtcttggaactaactaactc 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttggttttttgagacagggtttctctgtatagctctggctgtcttggaactaactaactc 319

                                                                       
Query: 120 tgtagtccagcctggcctcgaactcagaaatccgcctgcctctgcctcccgagtgctggg 179
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 320 tgtagtccagcctggcctcgaactcagaaatctgcctgcctctgcctcccgagtgctggg 379

                                                                       
Query: 180 actaaaggtgttcggcaccacggccagtgggtccttttcttcttagattcgcctttgata 239
           | ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 attaaaggtgtgcgccaccacggccagtgggtccttttcttcttagattcgcctttgata 439

                                                                       
Query: 240 aactcgctgtgaatccgatggctgttttgtattgaacttgttcatatatattggtttgtt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aactcgctgtgaatccgatggctgttttgtattgaacttgttcatatatattggtttgtt 499

                                                                       
Query: 300 ttgtaactgttatggccattttctacatgtccagtttttcaaataaaatcttttttaaaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttgtaactgttatggccattttctacatgtccagtttttcaaataaaatcttttttaaaa 559

                                                                       
Query: 360 acaatgtgtataaatactatgcctttgtgtatgtacatgtaccacatgtgtgcctagtat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 560 acaatgtgtataaatactatgcctttgtgtatgtacatgtaccacatgtgtgcctagcac 619

                                                                       
Query: 420 cctttgaggtcagaagagggtgtcagatctcctagaattagttattagtggttgtgagcc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cctttgaggtcagaagagggtgtcagatctcctagaattagttattagtggttgtgagcc 679

                                                                       
Query: 480 accattccggtactgagaaccaaacccaggccctctgcaagaacaagtgtttttaatctc 539
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 accattccagtactgagaaccaaacccaggccctctgcaagaacaagtgtttttaatctc 739

                                                                       
Query: 540 ttagctaactctccagccctagttttgagggctatcttagtcagggtttctattcctgca 599
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 740 ttagctaactctccagccctagttttgagggctatcttagtcggggtttctattcctgca 799

                                      
Query: 600 caaacatcatgaccaagacgcaagatg 626
           |||||||||||||||||||||||||||
Sbjct: 800 caaacatcatgaccaagacgcaagatg 826


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space:   625856
Effective search space used:   625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)