Query= MSMg01no147_e17.b1 MSMg01no147_e17.b1 CHROMAT_FILE:
MSMg01no147_e17.b1 PHD_FILE: MSMg01no147_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:51 2005
(311 letters)
>mm_chr9_61221655_61222369
Length = 715
Score = 555 bits (287), Expect = e-162
Identities = 307/315 (97%), Gaps = 4/315 (1%)
Strand = Plus / Plus
Query: 1 tcacaggtaaggcgggtggggggtggccccgggctggcgaggagggcggccttgcgcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacaggtaaggcgggtggggggtggccccgggctggcgaggagggcggccttgcgcgct 260
Query: 61 cctgctaccccccc---gcggggccgagggggacgtcgacccccggctgcggggcggctg 117
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgctaccccccccccgcggggccgagggggacgtcgacccccggctgcggggcggctg 320
Query: 118 ggcctccgccttttgtttcccctcaccgagcgcgcagccttaaccctttgcgttctgcga 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcctccgccttttgtttcccctcaccgagcgcgcagccttaaccctttgcgttctgcga 380
Query: 178 tctcccagctcctaaagcccgccctgtcgagggtcggggtcttgcgccttcgtccgggcc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctcccagctcctaaagcccgccctgtcgagggtcggggtcttgcgccttcgtccgggcc 440
Query: 238 cgaccc-gcgtgtccgagacgagtcccctcgctagatcaagggaagtttggagttggcac 296
|| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 cgcccccgcgtggccgagacgagtcccctcgctagatcaagggaagtttggagttggtac 500
Query: 297 tactaggctccgggt 311
| |||||||||||||
Sbjct: 501 tgctaggctccgggt 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 715
Length adjustment: 9
Effective length of query: 302
Effective length of database: 706
Effective search space: 213212
Effective search space used: 213212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_e17.g1 MSMg01no147_e17.g1 CHROMAT_FILE:
MSMg01no147_e17.g1 PHD_FILE: MSMg01no147_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:51 2005
(418 letters)
>mm_chr9_61365831_61366648
Length = 818
Score = 801 bits (414), Expect = 0.0
Identities = 417/418 (99%)
Strand = Plus / Minus
Query: 1 tgtggagagtccatgcaaggactctgcagagcactaaggctcctggccataggcgctgtc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 618 tgtggagagtccatgcaaggactctgcagagcactaaggctcctagccataggcgctgtc 559
Query: 61 tggggcctccaagcaaggcctgtcagatggttgcctctgtggaagtagacgttccaactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tggggcctccaagcaaggcctgtcagatggttgcctctgtggaagtagacgttccaactg 499
Query: 121 tattcatgtgtgtgatataattttagaagagcttggatgtcatcacatcccaaaataccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tattcatgtgtgtgatataattttagaagagcttggatgtcatcacatcccaaaataccc 439
Query: 181 ttccttaatgtctacttgctacattaattcaccactagaatttatcttctttaacttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttccttaatgtctacttgctacattaattcaccactagaatttatcttctttaacttaat 379
Query: 241 acttgattgcacgttcaaatgtgcatcttcctgggaaatgggcagtttgttcgaacccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 acttgattgcacgttcaaatgtgcatcttcctgggaaatgggcagtttgttcgaacccac 319
Query: 301 tgctggccaatactatatccctctgccgtggtgaggctttaagtccctcctcaagggaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tgctggccaatactatatccctctgccgtggtgaggctttaagtccctcctcaagggaga 259
Query: 361 gccggtcgagggctggggacaagggtactgggtgtctggggtgggggctggagagcag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gccggtcgagggctggggacaagggtactgggtgtctggggtgggggctggagagcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
