Query= MSMg01no147_m06.b1 MSMg01no147_m06.b1 CHROMAT_FILE:
MSMg01no147_m06.b1 PHD_FILE: MSMg01no147_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:26 2005
(503 letters)
>mm_chr9_97786601_97787503
Length = 903
Score = 675 bits (349), Expect = 0.0
Identities = 402/431 (93%), Gaps = 20/431 (4%)
Strand = Plus / Minus
Query: 77 gtaaaccctcccagcctggacagcatttgcagtttgctacagaaacaagatgaatacaca 136
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 903 gtaaaccctcccagcctggacagcatttgcagtttgctacagaaacaagacgaatacaca 844
Query: 137 gagtacagcaagaatagggaaatgactatctcaaccatgcatctgccatttaacagctct 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 gagtacagcaagaatagggaaatgactatctcaaccatgcatctgccatttaacagctct 784
Query: 197 ctctctctctctctctctctctctctctcacacacacacacacacacacacacacacaca 256
|||||||||||||||||||||||||||| | | | | | ||||||||||
Sbjct: 783 ctctctctctctctctctctctctctct------------ctctctctctcacacacaca 736
Query: 257 cacacacacacacacacacacacacacacacatttactttctggaaagagggcccccaag 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 cacacacacacacacacacacacacacacacatttactttctggaaagagggcccccaag 676
Query: 317 aaaagggaagatgctccttgttagtgataggatggaggaaaagtgaaattgtt----acc 372
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 675 caaagggaagatgctccttgttagtgataggatggaggaaaagtgaaattgttaggga-- 618
Query: 373 ccacgcaagaaaacaatgggtaaaaaactttgtatcatagcagaatttgtcaatttaggt 432
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 --aggcaagaaaacaatgggtaaaaaactttgtatcatagcagaatttgtcaatttaggt 560
Query: 433 ttttaccccccttggggcaaatccatctcaactgtcaagaagccactaacagtgaataat 492
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttttaccccccttggggcaaatctatctcaactgtcaagaagccactaacagtgaataat 500
Query: 493 gagggaaagac 503
|||||||||||
Sbjct: 499 gagggaaagac 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 96
Number of extensions: 32
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_m06.g1 MSMg01no147_m06.g1 CHROMAT_FILE:
MSMg01no147_m06.g1 PHD_FILE: MSMg01no147_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:26 2005
(338 letters)
>mm_chr9_97643448_97644177
Length = 730
Score = 545 bits (282), Expect = e-159
Identities = 321/338 (94%), Gaps = 8/338 (2%)
Strand = Plus / Plus
Query: 1 attagcaatgctaataaagagccagggacttgggcctgagaggaaactgtaggatgctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attagcaatgctaataaagagccagggacttgggcctgagaggaaactgtaggatgctgt 260
Query: 61 aggagggaggtcttgtataatattaccataggcatatataccttgagggagtttggctag 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaaggaggtcttgtataatattaccataggcatatataccttgagggagtttggctag 320
Query: 121 acctttatcaacagagtgcaccaaaaccttttaaaccatggggaattacaactgggtttc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctttatcaacagagtgcatcaaaaccttttaaaccatggggaattacaactgggtttc 380
Query: 181 ttcctgaaacacaaaagaactttttctacgtgttcatatgaaagaatggatgatatgttg 240
| || ||||||||||||||||||||||| |||||||||||||||||||||| | ||||
Sbjct: 381 tgccagaaacacaaaagaactttttctaagtgttcatatgaaagaatggat---aggttg 437
Query: 241 ttgtgggcagggagtgaagcaatcccatctccagcaaagagctgctgggtctgagggtgt 300
||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||
Sbjct: 438 ttgtgggcagggagtgaggcaatccaatc-----caaagagctgctgggtctgagggtgt 492
Query: 301 tgttgtatgaacacttacagaggttgtgctgatgttgt 338
|||||||||||||||||||||||||| |||||||||||
Sbjct: 493 tgttgtatgaacacttacagaggttgagctgatgttgt 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 730
Length adjustment: 9
Effective length of query: 329
Effective length of database: 721
Effective search space: 237209
Effective search space used: 237209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
