Query= MSMg01no148_n11.b1 MSMg01no148_n11.b1 CHROMAT_FILE:
MSMg01no148_n11.b1 PHD_FILE: MSMg01no148_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:52 2005
(631 letters)
>mm_chr9_68784768_68785799
Length = 1032
Score = 1085 bits (561), Expect = 0.0
Identities = 613/631 (97%), Gaps = 4/631 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttgcatctc--tccctaagct-aaaccatcgacagtgggttccatctcctct 60
||||||||||||| | | ||||||||| |||||||| ||||||| |||||||||||||
Sbjct: 203 ggaattctttgca-cacaacccctaagctaaaaccatccacagtggcttccatctcctct 261
Query: 61 tggccacatctgagcacagcacacagccttacatgataggtgcccaacttcataggacta 120
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 262 tggccacatctgagcatagcacacagccttccatgataggtgcccaacttcataggacta 321
Query: 121 atgtgtgtgtatatgtgtgcatagactggcatagttacattaagccagcactttataaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 322 atgtgtgtgtatatgtgtgcatagactggcatagttacattaagccagcactttctaaaa 381
Query: 181 tgtgtttttaattctaccttctcaggtatcttcttagacattgtttttctaactgcccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgtgtttttaattctaccttctcaggtatcttcttagacattgtttttctaactgcccat 441
Query: 241 tttcatgaaattttaattccacagacacactgtgcgtttatgccagtgtggatatgttta 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 442 tttcatgaaattttaattccacagacacattgtgcgtttatgccagtgtggatatgttta 501
Query: 301 tgattacatagtgtatattcatctgcactttctacataaaaacagcaatcttttagtttc 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgattacatagtgtgtattcatctgcactttctacataaaaacagcaatcttttagtttc 561
Query: 361 gttcccaacaactaattttgcctctttgaaaggagggaacctcacttaagaaaatgcctc 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gttcccaagaactaattttgcctctttgaaaggagggaacctcacttaagaaaatgcctc 621
Query: 421 cgtaagattaggttgtaggcaagcctgtggacattttcttaactggtaattgatggatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cgtaagattaggttgtaggcaagcctgtggacattttcttaactggtaattgatggatga 681
Query: 481 gtatccagccaactgtgggtagtgccatccctgggctgatggtcctgggttccatgaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gtatccagccaactgtgggtagtgccatccctgggctgatggtcctgggttccatgaaaa 741
Query: 541 agcaggctgagcaagtaatgaggtacaagccagtaagcagaacccctccgtggcctccgc 600
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 742 agcaggctgagcaagtcatgaggtacaagccagtaagcagaaccgctccgtggcctccac 801
Query: 601 atcagctcctgcctccagattcctgtcttgg 631
||||| |||||||||||||||||||||||||
Sbjct: 802 atcagttcctgcctccagattcctgtcttgg 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1032
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1022
Effective search space: 634662
Effective search space used: 634662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_n11.g1 MSMg01no148_n11.g1 CHROMAT_FILE:
MSMg01no148_n11.g1 PHD_FILE: MSMg01no148_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:52 2005
(633 letters)
>mm_chr9_68889535_68890567
Length = 1033
Score = 1133 bits (586), Expect = 0.0
Identities = 622/634 (98%), Gaps = 2/634 (0%)
Strand = Plus / Minus
Query: 1 tgtgatagtaagatgccatgaaagaagccatgggccattaaacaccacagccaggataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 tgtgatagtaagatgccatgaaagaagccatgggccattaaacaccacagccaggataat 774
Query: 61 ggttttgtggaacataca-ttttttctaacctctcaccacatacacctagcttgttcact 119
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 ggtttcgtggaacatacatttttttctaacctctcaccacatacacctagcttgttcact 714
Query: 120 actgttccagagatagcttcatgattctgcagaatacataaacaagaaaaaacaatacaa 179
||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 713 actgtgccagggatagcttcatgattctgcagaatacataaacaagaaaagacaatacaa 654
Query: 180 tgcccccacccaatatgaagaaattgcaatgagtttggtgctgtctgggcatctccaaaa 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 cgcccccacccaatatgaagaaattgcaatgagtttggtgctgtctgggcatctccaaaa 594
Query: 240 tgcaaattaggtacaggttagaaaggatctgtcaccgtaagatctagggtagtaattact 299
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 593 tgcaaattaggtacaagttagagaggatctgtcaccgtaagatctagggtagtaattact 534
Query: 300 gtatggccatcagatttgtccattgtgctagacatgcatggccacccctaaagcacagtg 359
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 533 gtatggccatcagatttgtccattgtgctagacatgcatggccagtcctaaagcacagtg 474
Query: 360 ccaccacccttcttagtgtcaactctgcatgtacctggtctcttccggaacaggactaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ccaccacccttcttagtgtcaactctgcatgtacctggtctcttccggaacaggactaga 414
Query: 420 aatcacaaaggctctacctgtgttttatgtcaggaaagaaatggcctctactcagcaaac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aatcacaaaggctctacctgtgttttatgtcaggaaagaaatggcctctactcagcaaac 354
Query: 480 tgcaaggagacttgttattttcaggagctctagattttttttttagcagattaccaaggt 539
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 353 tgcaaggagacttgttattttcaggagctctaga-tttttttttagcagattaccaaggt 295
Query: 540 gatgacattcagcttaagaccacctatcaacggaaggatgcatgcgagccctttcctgag 599
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 294 gatgacattcagcttaagaccacctatcaatggaaggatgcatgcgagccctttcctgag 235
Query: 600 gcccttgggaaggcaccattttcagaacaaaggc 633
||||||||||||||||||||||||||||||||||
Sbjct: 234 gcccttgggaaggcaccattttcagaacaaaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
