Query= MSMg01no150_f02.b1 MSMg01no150_f02.b1 CHROMAT_FILE:
MSMg01no150_f02.b1 PHD_FILE: MSMg01no150_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:50 2005
(496 letters)
>mm_chr9_62315712_62316605
Length = 894
Score = 688 bits (356), Expect = 0.0
Identities = 430/492 (87%), Gaps = 58/492 (11%)
Strand = Plus / Plus
Query: 5 gaattcaaacggagccagtcaggttcccttggccctgttcaaaggcttaatcccctctca 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattcaaacggagccagtcaggttcccttggccctattcaaaggcttaatcccctctca 264
Query: 65 catctctgtccttgtccctgatggatttctcttcctggccttatttcccttctcctgggc 124
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catct--gtccttgtccctgatggatttctcttcctggccttatttcccttctcctgggc 322
Query: 125 cctgtgagtgccttactttattatctgcttctcctattcaaatgtaggctctgggaaagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cctgtgagtgccttactttattatctgcttctcctattcaaatgtaggctctgggaaagc 382
Query: 185 tgagctcttctttctttctttctttctttctttctttctttctttctttctttctttctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgagctcttctttctttctttctttctttctttctttctttctttctttctttctttctt 442
Query: 245 tctttctttctttctttctttctttctttctttctttctttctttctttctttctttctt 304
||||||
Sbjct: 443 tctttc------------------------------------------------------ 448
Query: 305 tccctcctttatttctggtcactgcaggatcagtagcactttccatggtgccctgcacat 364
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 449 --cctcctttatttctggtcactacaggatcagtagcactttccatggtgccctgcacat 506
Query: 365 agtaggtgttcagggagcataatggagaaagctctgtcttctgggatatgccataccaga 424
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 507 agtaggtgttcagggagcataatggagaaagctctgacttctgggatatgccataccaga 566
Query: 425 tggtattcacagagcatctaatatgtgttagggatatatatatatatatatatatatata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tggtattcacagagcatctaatatgtgttagggatatatatatatatatatatatatata 626
Query: 485 tatatatgtata 496
||||||| ||||
Sbjct: 627 tatatatatata 638
Score = 68.4 bits (35), Expect = 1e-15
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 458 atatatatatatatatatatatatatatatatatgtata 496
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 639 atatatatatatatatatatatatatatatatatatata 601
Score = 68.4 bits (35), Expect = 1e-15
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 458 atatatatatatatatatatatatatatatatatgtata 496
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 641 atatatatatatatatatatatatatatatatatatata 603
Score = 66.5 bits (34), Expect = 4e-15
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 458 atatatatatatatatatatatatatatatatat 491
||||||||||||||||||||||||||||||||||
Sbjct: 633 atatatatatatatatatatatatatatatatat 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 124
Number of extensions: 51
Number of successful extensions: 51
Number of sequences better than 10.0: 1
Number of HSP's gapped: 37
Number of HSP's successfully gapped: 6
Length of query: 496
Length of database: 894
Length adjustment: 10
Effective length of query: 486
Effective length of database: 884
Effective search space: 429624
Effective search space used: 429624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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