Query= MSMg01no152_o16.b1 MSMg01no152_o16.b1 CHROMAT_FILE:
MSMg01no152_o16.b1 PHD_FILE: MSMg01no152_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:09 2005
(362 letters)
>mm_chr9_30037457_30038218
Length = 762
Score = 646 bits (334), Expect = 0.0
Identities = 355/362 (98%), Gaps = 2/362 (0%)
Strand = Plus / Minus
Query: 1 atcttgagccttgagagggttttccatctttaagtctcacctcaaccagtgttgaggtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcttgagccttgagagggttttccatctttaagtctcacctcaaccagtgttgaggtag 502
Query: 61 attcctagctagcgattctctctttgtaccaaatgtcaacttttcaaaacaccattctaa 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttctagctagcgattctctctttgtaccaaatgtcaacttttcaaaacaccattctaa 442
Query: 121 aattcctaccattgattcccattctttaggcaagacggttgcctccccccacatccacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aattcctaccattgattcccattctttaggcaagacggttgcctccccccacatccacag 382
Query: 181 ctctgaacaggacca-gtgaccactgttcagggttgggtctaagctcatcatttctgcct 239
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctgaacagga-caggtgaccactgttcagggttgggtctaagctcatcatttctgcct 323
Query: 240 cccttctagaccacatgttcatgacgccgtgatgttgccattttctgtgctcagtgcggt 299
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 322 cccttctagaccacatgttcatgacaccgtgatgttgccattttctgtgctcagtgtggt 263
Query: 300 gtctatattgcaagcatgtctttctctttcatcttccctcctttctccttttcttgctta 359
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtctatattgtaagtatgtctttctctttcatcttccctcctttctccttttcttgctta 203
Query: 360 gg 361
||
Sbjct: 202 gg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_o16.g1 MSMg01no152_o16.g1 CHROMAT_FILE:
MSMg01no152_o16.g1 PHD_FILE: MSMg01no152_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:09 2005
(375 letters)
>mm_chr9_29886681_29887455
Length = 775
Score = 694 bits (359), Expect = 0.0
Identities = 371/375 (98%)
Strand = Plus / Plus
Query: 1 tgtagaaaggtagaacgctgtatacatgtgaagaaggcagggcaatgagggctgcaggca 60
||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 201 tgtagaaaggtagaatgctgtatacaggtgaagaaggcagggcaatgagggcagcaggca 260
Query: 61 gaatggcttatgggagaagaggaggagaatctagaaaacatctgagtcccaagtgctaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatggcttatgggagaagaggaggagaatctagaaaacatctgagtcccaagtgctaag 320
Query: 121 gaaccacaggcttttttctaagaaaccatcaaaattcaggaaaggcaaaattgaactcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaccacaggcttttttctaagaaaccatcaaaattcaggaaaggcaaaattgaactcca 380
Query: 181 gacagtacgttaatacaacatgggggatgcttgtaccttactgtacaaagagatttcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagtacgttaatacaacatgggggatgcttgtaccttactgtacaaagagatttcatt 440
Query: 241 atcttttgtcctaatcatttactacaaactaaggtaggagcctaacccaaggcctacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcttttgtcctaatcatttactacaaactaaggtaggagcctaacccaaggcctacaaa 500
Query: 301 tgagcttttttaaacagaagaggcattttcggtgataaagcctagactctcttacgatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgagcttttttaaacagaagaggcattttcggtgataaagcctagactctcttacgatgc 560
Query: 361 aggcatgagtgaagc 375
||||||| |||||||
Sbjct: 561 aggcatgggtgaagc 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
