Query= MSMg01no154_e03.b1 MSMg01no154_e03.b1 CHROMAT_FILE:
MSMg01no154_e03.b1 PHD_FILE: MSMg01no154_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:50 2005
(387 letters)
>mm_chr9_115759137_115759923
Length = 787
Score = 559 bits (289), Expect = e-163
Identities = 322/333 (96%)
Strand = Plus / Minus
Query: 54 ttaaacagaggggtgggctgtgaatgtaactcaactggtaccctaccaggcttggcttac 113
|||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 787 ttaaacagagggatgggttgtggatgtaactcaaccggtaccctaccaggcttggcttac 728
Query: 114 aggctccgggttggatcccagtacctataaaggagacatggagacacacatctctgttct 173
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 727 aggctccgggttggatcccagtacctataaaggagacatagagacacacatctctgttct 668
Query: 174 caatgcttgggacgtggaggtgagaggatgtagagttcaaggtcagcctgggctacaaga 233
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 667 caatgcttgggacgtggaggtgagaggatgtatagttcaaggtcagcctgggctacaaga 608
Query: 234 gaaggtttcagaacatgtcagtagcactcttctgtcaggaaagccttaaaaacttggcag 293
| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ggcggtttcagaaaatatcagtagcactcttctgtcaggaaagccttaaaaacttggcag 548
Query: 294 gctttcaggttgccaactaaagatattctcaggggttcatttcaataacggtacctggta 353
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 547 gctttcaggttgccaactaaagatattctcaggggttcatttcaataactgtacctggta 488
Query: 354 ttaatgatctaccgctgaggagtttaaacatgc 386
|||||||||||||||||||||||||||||||||
Sbjct: 487 ttaatgatctaccgctgaggagtttaaacatgc 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_e03.g1 MSMg01no154_e03.g1 CHROMAT_FILE:
MSMg01no154_e03.g1 PHD_FILE: MSMg01no154_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:50 2005
(452 letters)
>mm_chr9_115621165_115622018
Length = 854
Score = 766 bits (396), Expect = 0.0
Identities = 436/450 (96%), Gaps = 2/450 (0%)
Strand = Plus / Plus
Query: 4 tcaacaagctggatgcctcagcacttccaatgtggtactgaaggcctggtcactggtctt 63
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tcaacaagctggatgcctcagtacttccaatgtggtactgaaggcctggtcactggtctt 263
Query: 64 cagtccacattggaaggcagaagaagatggagtctgaggagaagggaagatggcaccagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagtccacattggaaggcagaagaagatggagtctgaggagaagggaagatggcaccagc 323
Query: 124 agcagagcttacagtaagatagatgcaggaaaacagtcttaatgtctcctcagacttcct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agcagagcttacagtaagatagatgcaggaaaacagtcttaatgtctcctcagacttcct 383
Query: 184 acatagggtcaccaccagaaggttctgcccacactgggaagtctgtttcctacttcatta 243
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 384 acatagggtcaccaccagaaggttctgcccacactggggagtctgtttcctacttcatta 443
Query: 244 ctggttcttggatttgctcagaggcctgtctcttagttgatttcagattccactcaggaa 303
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 444 ctggttcttggatttgctcagaggcctgtctcttagtcgatttcagattccactcaggaa 503
Query: 304 aacacccaaggtcaacatcatagtctacacctgctcatgtctttaggaatgagcgctgcc 363
|||| |||||||||||||||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 504 gacacacaaggtcaacatcatagtctacccctgctcatgtctctaggagtgagcgctgcc 563
Query: 364 caccttcaaacagcatggggaaa--cagcagatcctttgcacgtgatctcctccactcag 421
|||||||||| |||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 564 caccttcaaaaagcatggggaaaaacaccagatcctttgcacgtgatctcctccactcaa 623
Query: 422 tattgtttgtgaggtccattcatgctgtag 451
||||||||||||||| ||||||||||||||
Sbjct: 624 tattgtttgtgaggttcattcatgctgtag 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 854
Length adjustment: 10
Effective length of query: 442
Effective length of database: 844
Effective search space: 373048
Effective search space used: 373048
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
