Query= MSMg01no155_i01.b1 MSMg01no155_i01.b1 CHROMAT_FILE:
MSMg01no155_i01.b1 PHD_FILE: MSMg01no155_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:25 2005
(243 letters)
>mm_chr9_108504026_108504669
Length = 644
Score = 391 bits (202), Expect = e-113
Identities = 224/234 (95%), Gaps = 6/234 (2%)
Strand = Plus / Minus
Query: 10 ctagaacaagctcacgcccacaatgacacacccaactccaacaaggctacacttcctaat 69
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 548 ctagaacaagctcacgcccacaatgacacacccaact-taacaaggctacacttcctaat 490
Query: 70 agtgtccctccctgggccaagcatatgcaaaccatcacaagagaaactagcactagcaca 129
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 489 agtgtccctccctgggccgagcatatgcaaaccatcacaagagaaactagcact-----a 435
Query: 130 gcacggggtggggggtgggggggacagggagagcatacacaactccacactgctggtctt 189
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 434 gcacggggtgggaggtgggggggacagggagggcatacacaactccacactgctggtctt 375
Query: 190 ggccttgagtgtactgctcttattaccactgggtacactgaagttccagaggac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggccttgagtgtactgctcttattaccactgggtacactgaagttccagaggac 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 644
Length adjustment: 9
Effective length of query: 234
Effective length of database: 635
Effective search space: 148590
Effective search space used: 148590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no155_i01.g1 MSMg01no155_i01.g1 CHROMAT_FILE:
MSMg01no155_i01.g1 PHD_FILE: MSMg01no155_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:25 2005
(397 letters)
>mm_chr9_108425573_108426370
Length = 798
Score = 731 bits (378), Expect = 0.0
Identities = 393/398 (98%), Gaps = 1/398 (0%)
Strand = Plus / Plus
Query: 1 actctgtagaccaggctggccttgagctcacagagatccccaagtttctacctcttgagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctgtagaccaggctggccttgagctcacagagatccccaagtttctacctcttgagc 260
Query: 61 gctgagattaaaggtgggtgccactaagcctggctcacaatatttctttaaaatacactt 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgagattaaaggtgggcgccactaagcctggctcacaatatttctttaaaatacactt 320
Query: 121 agaagctaagtccatgtgtagggccttggatttgattcccagccggccataactccacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaagctaagtccatgtgtagggccttggatttgattcccagccggccataactccacag 380
Query: 181 taggaacagcgggtttaaaaacaatgtgtgtgtgtcagatgaactcttgggaaagtgcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggaacagcgggtttaaaaacaatgtgtgtgtgtcagatgaactcttgggaaagtgcta 440
Query: 241 tatatatattttttt-ctccaaaacagcatttgtgtgtcagattgaagctagcttgatga 299
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatatattttttttttctccaaaacagcatttgtgtgtcagattgaagctagcttgatga 500
Query: 300 acttttgtttattgggatattgtagtgtgaagggtagttttgaagtttgctgtggcctga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acttttgtttattgggatattgtagtgtgaagggtagttttgaagtttgctgtggcctga 560
Query: 360 aaacagtgagtttctataggataacggaatatctattg 397
|||||||||||||||||||||||| || ||||||||||
Sbjct: 561 aaacagtgagtttctataggataaaggcatatctattg 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 798
Length adjustment: 9
Effective length of query: 388
Effective length of database: 789
Effective search space: 306132
Effective search space used: 306132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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