Query= MSMg01no155_n05.b1 MSMg01no155_n05.b1 CHROMAT_FILE:
MSMg01no155_n05.b1 PHD_FILE: MSMg01no155_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:49 2005
(222 letters)
>mm_chr9_56630675_56631296
Length = 622
Score = 398 bits (206), Expect = e-115
Identities = 218/222 (98%)
Strand = Plus / Minus
Query: 1 ggtgctgcatgctctccccatggctcccacaccaccttgtctgtaactggtgcctgacat 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 422 ggtgctgcatgctctccccatggctcccataccaccttgtctgtaactggtgcctgacat 363
Query: 61 gtagggggcactgcaggcttcagcctcctctagcgtgggactggccttactcagttctca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 362 gtagggggcactgcaggcttcagcctcctctagcgtgggactggccttactcagttttca 303
Query: 121 atcattgggattgattcctcaattcctgcctggcagttctcaatcactttggggtatgga 180
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 302 attattgggattgattcctcaattcctgcttggcagttctcaatcactttggggtatgga 243
Query: 181 caccctatatctgaagggtcctgatatgtgtgtgcagaagcc 222
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caccctatatctgaagggtcctgatatgtgtgtgcagaagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 622
Length adjustment: 9
Effective length of query: 213
Effective length of database: 613
Effective search space: 130569
Effective search space used: 130569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no155_n05.g1 MSMg01no155_n05.g1 CHROMAT_FILE:
MSMg01no155_n05.g1 PHD_FILE: MSMg01no155_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:49 2005
(253 letters)
>mm_chr9_56534059_56534714
Length = 656
Score = 441 bits (228), Expect = e-128
Identities = 248/256 (96%), Gaps = 3/256 (1%)
Strand = Plus / Plus
Query: 1 caggtgataagcagaaaaacaagacacttcctaagagtgtcaagctcagcgacaacccta 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtaataagcagaaaaacaagacacttcctaagagtgtcaagctcagcgacaacccta 260
Query: 61 acatccagccacagaggagggaac---agaaggacaggggggcgctctagatagagggtc 117
|||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||
Sbjct: 261 acatccagccacagaggagggaacaggagaaggacagggggacgctctagacagagggtc 320
Query: 118 aggggaggtcttcctgaagggggccacaattgaacttaggcttcaggaagtcaggcttcc 177
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 321 aggggaggtcttcctgaagggggccacaactgaacttaggcttcaggaagtgaggcttcc 380
Query: 178 aggagcctgaggcactgaaggccaagatggggcctttggctctgatcccaagaacaagaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggagcctgaggcactgaaggccaagatggggcctttggctctgatcccaagaacaagaa 440
Query: 238 aagccactggagggcc 253
||||||||||||||||
Sbjct: 441 aagccactggagggcc 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 656
Length adjustment: 9
Effective length of query: 244
Effective length of database: 647
Effective search space: 157868
Effective search space used: 157868
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
