Query= MSMg01no156_a21.b1 MSMg01no156_a21.b1 CHROMAT_FILE:
MSMg01no156_a21.b1 PHD_FILE: MSMg01no156_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:05 2005
(315 letters)
>mm_chr9_69845347_69846061
Length = 715
Score = 584 bits (302), Expect = e-171
Identities = 308/310 (99%)
Strand = Plus / Plus
Query: 5 gaattccaggctagcctggtctacgtagtaagttcagtgacatccaggacgacatagatc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggctagcctggtctacgtagtaagttcagtgacatccaggacgacatagatc 264
Query: 65 ctgtcacaaataataacaataactctctaagcaccggcagagaaggtgctgaggaggctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgtcacaaataataacaataactctctaagcaccggcagagaaggtgctgaggaggctg 324
Query: 125 tacttagaaagctgcgccttgaagtagtgagtgcttagccccagtgtggcactgcgattg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tacttagaaagctgcgccttgaagtagtgagtgcttagccccagtgtggcactgcgattg 384
Query: 185 taagcagttggtgtgcagaggcattggtgtatgttttgttttgtgtgtgttctagaacta 244
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 385 taagcagttggtgtgcagaggcattggtgtatgttttgttttgtgtgcgttctagaacta 444
Query: 245 ggcagtagttgattgtgagatttagacagatattattaatctttttgtttcatctttaaa 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 ggcagtagttgattgtgagatttagacagatattaataatctttttgtttcatctttaaa 504
Query: 305 gtgaattttg 314
||||||||||
Sbjct: 505 gtgaattttg 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_a21.g1 MSMg01no156_a21.g1 CHROMAT_FILE:
MSMg01no156_a21.g1 PHD_FILE: MSMg01no156_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:05 2005
(299 letters)
>mm_chr9_69979862_69980560
Length = 699
Score = 505 bits (261), Expect = e-147
Identities = 287/299 (95%), Gaps = 6/299 (2%)
Strand = Plus / Minus
Query: 7 aattcttaaaattgtttaaccgggaagatgtttttcagaaacccctggtgccttcagctt 66
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 311 aattcttaaaattgtttaaccgggaagatgtttttcagaaacccctggtgccttgagctt 252
Query: 67 gtttttctgtttatttcatattgtttttctccctg------ttttttttttaattatccc 120
||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 251 gtttttctgtttatttcatattgtttttctccctgttttttttttttttttaattagccc 192
Query: 121 tggaagggctcaagagtcctcccttgcactctaaatagttaagagtattagtgtgttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tggaagggctcaagagtcctcccttgcactctaaatagttaagagtattagtgtgttgtg 132
Query: 181 ctgtggtcacttcagctagggggaatctctgggaaggaggttcccaggactggcagagaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 131 ctgtggtcacttcagctagggggaatctctgggaaggaggttcccaggaccggcagagaa 72
Query: 241 gggcagtggtgtcccctgattgcccagacaagggcatgaggctggaggtgggggtttct 299
||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 71 gggcagttgtgtcccctgagtgcccagacaagggcatgaggctggaggtaggggtttct 13
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
