Query= MSMg01no158_a22.b1 MSMg01no158_a22.b1 CHROMAT_FILE:
MSMg01no158_a22.b1 PHD_FILE: MSMg01no158_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:31 2005
(281 letters)
>mm_chr9_110617844_110618524
Length = 681
Score = 495 bits (256), Expect = e-144
Identities = 271/278 (97%), Gaps = 4/278 (1%)
Strand = Plus / Plus
Query: 4 ggaattcattaatttcatgtattttgcctgagtgtatgtttgtaaccagatctctgcctg 63
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 208 ggaattcattaatttcatgtattttgcctgagtgta----tgtaaccagatctctgcctg 263
Query: 64 gtgcccatggaggccagaagagggcatcagatcccctggaactgtagttccagatggttg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtgcccatggaggccagaagagggcatcagatcccctggaactgtagttccagatggttg 323
Query: 124 tgagcaaagggagctacatagccaaggaagctgaaccaatagccctaaaatgaatgtctg 183
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 324 tgagcaaagggagctacatagccaaggaaactgaaccaatagccctaaaatgaatgtctg 383
Query: 184 ttttattctcagagaaataagaggagctgtccctcttgacacaacaagaattagatgtaa 243
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 384 ttttattctcagagaaataagagtagctatccctcttgacacaacaagaattagatgtaa 443
Query: 244 gaactgattagaaaccctgaaaatcagctcaaagtggt 281
||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaactgattagaaaccctgaaaatcagctcaaagtggt 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no158_a22.g1 MSMg01no158_a22.g1 CHROMAT_FILE:
MSMg01no158_a22.g1 PHD_FILE: MSMg01no158_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:31 2005
(289 letters)
>mm_chr9_110767804_110768494
Length = 691
Score = 476 bits (246), Expect = e-139
Identities = 280/292 (95%), Gaps = 4/292 (1%)
Strand = Plus / Minus
Query: 1 caccccggccccatgctttgtcgggcccttggggactcctgtagaagttacacaacaact 60
|||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |
Sbjct: 491 caccccggccccatgctttgtcaggcccttggggactcctgtagaagtgacacaacaa-t 433
Query: 61 -cataataaaaggtgcctcagacaagcctgacgttctctccctgacccctgtcccagact 119
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acataataaaaggcgcctcagacaagcctgacgttctctccctgacccctgtcccagact 373
Query: 120 a--agaaaaaaaaagcccagtgacaggagcagttacatccgtcccaccgcaccaagagga 177
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 372 aataaaaaaaaaaagcccagtgacaggagcagttacatccgtcccaccgcaccaagagaa 313
Query: 178 cagggagggaaactgaggtgctaagcagggctctcctctacgctaccgtgctctcaacag 237
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 312 cagggagggaaactgaggtgctaagcaaggctctcctctacgctaccgtgctctcaacag 253
Query: 238 gcctctgacggtttgagcctggtgctggggctcacagaaatcacccctcctc 289
||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 252 gcctctgtcggtttgagcctggtgctggggctcacaggaatcacccctcctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 691
Length adjustment: 9
Effective length of query: 280
Effective length of database: 682
Effective search space: 190960
Effective search space used: 190960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
