Query= MSMg01no158_f13.b1 MSMg01no158_f13.b1 CHROMAT_FILE:
MSMg01no158_f13.b1 PHD_FILE: MSMg01no158_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:52 2005
(270 letters)
>mm_chr9_69979865_69980534
Length = 670
Score = 470 bits (243), Expect = e-137
Identities = 263/273 (96%), Gaps = 6/273 (2%)
Strand = Plus / Minus
Query: 4 ggaattcttaaaattgtttaaccgggaagatgtttttcagaaacccctggtgccttgagc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ggaattcttaaaattgtttaaccgggaagatgtttttcagaaacccctggtgccttgagc 251
Query: 64 ttgtttttctgtttatttcatattgtttttctccctg------ttttttttttaattatc 117
||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 250 ttgtttttctgtttatttcatattgtttttctccctgttttttttttttttttaattagc 191
Query: 118 cctggaagggctcaagagtcctcccttgcactctaaatagttaagagtattagtgtgttg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cctggaagggctcaagagtcctcccttgcactctaaatagttaagagtattagtgtgttg 131
Query: 178 tgctgtggtcacttcagctagggggaatctctgggaaggaggttcccaggactggtagag 237
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 130 tgctgtggtcacttcagctagggggaatctctgggaaggaggttcccaggaccggcagag 71
Query: 238 aagggcagtggtgtcccctgagtgcccagacaa 270
||||||||| |||||||||||||||||||||||
Sbjct: 70 aagggcagttgtgtcccctgagtgcccagacaa 38
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no158_f13.g1 MSMg01no158_f13.g1 CHROMAT_FILE:
MSMg01no158_f13.g1 PHD_FILE: MSMg01no158_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:52 2005
(207 letters)
>mm_chr9_69836619_69837225
Length = 607
Score = 393 bits (203), Expect = e-114
Identities = 206/207 (99%)
Strand = Plus / Plus
Query: 1 aaggccaactcggaacacaggagaggagtctggggaggagaggggtggggtacttattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccaactcggaacacaggagaggagtctggggaggagaggggtggggtacttattac 260
Query: 61 tctctcagaagcattactggagagaaaaactattcacgtcggaaaattctatcaaagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctcagaagcattactggagagaaaaactattcacgtcggaaaattctatcaaagtag 320
Query: 121 attcttctaggacctggctatcgcacataagacatcgactatttttcacccccttttcat 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcttctaggacctggctatcgtacataagacatcgactatttttcacccccttttcat 380
Query: 181 tcactctgtaatatagttaatataatg 207
|||||||||||||||||||||||||||
Sbjct: 381 tcactctgtaatatagttaatataatg 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 607
Length adjustment: 9
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
