Query= MSMg01no162_h15.b1 MSMg01no162_h15.b1 CHROMAT_FILE:
MSMg01no162_h15.b1 PHD_FILE: MSMg01no162_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:51 2005
(318 letters)
>mm_chr9_75966916_75967633
Length = 718
Score = 607 bits (314), Expect = e-178
Identities = 314/314 (100%)
Strand = Plus / Minus
Query: 5 gaattcagttctgcttattatctcttttagtgttgcctattttctttttaaatttgtgta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattcagttctgcttattatctcttttagtgttgcctattttctttttaaatttgtgta 459
Query: 65 tatcaagtggacactacagtgagcctgactgcagcacttcacacatgtacataacatact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tatcaagtggacactacagtgagcctgactgcagcacttcacacatgtacataacatact 399
Query: 125 ttagtcacgtccagctcccttcatatgcctgttcccccactgaagaagcagcgcctgctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttagtcacgtccagctcccttcatatgcctgttcccccactgaagaagcagcgcctgctt 339
Query: 185 ttcttcttgactgactctcttcattcctcatccaccatccatggttttctagtatgttaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttcttcttgactgactctcttcattcctcatccaccatccatggttttctagtatgttaa 279
Query: 245 taggaaatgactagaccaatgtcctgtaaacacaaggattttcatatatgcatggtttca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 taggaaatgactagaccaatgtcctgtaaacacaaggattttcatatatgcatggtttca 219
Query: 305 gttaataaagataa 318
||||||||||||||
Sbjct: 218 gttaataaagataa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_h15.g1 MSMg01no162_h15.g1 CHROMAT_FILE:
MSMg01no162_h15.g1 PHD_FILE: MSMg01no162_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:51 2005
(262 letters)
>mm_chr9_75900565_75901225
Length = 661
Score = 472 bits (244), Expect = e-137
Identities = 257/262 (98%), Gaps = 3/262 (1%)
Strand = Plus / Plus
Query: 2 cctctcttatcctctcccttctcttcctcttccatcttatagtaccatcaccttactccc 61
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cctctcttatcccctcccttctcttcctcttccatcttatagtaccatcaccttactccc 261
Query: 62 tcccccccgccccgctaaatttacataaccaagaaaacatgatacttatctttgtgaagc 121
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 -ccccctcgccccgctaaatttacataaccaagaaaacatgatacttatctttgtgaagc 320
Query: 122 tggcttatttggcatagcatatgtttttctgaaaaatagcatatttttatggatgagtaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcttatttggcatagcatatgtttttctgaaaaatagcatatttttatggatgagtaa 380
Query: 182 aatacacagatcacattttctatttccatccatctgtcattgagtacctagactgatttt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatacacagatcacattttctatttccatccatctgtcattgagtacctagactgatttt 440
Query: 242 ctgact--gctgttctaaatag 261
|||||| ||||||||||||||
Sbjct: 441 ctgacttggctgttctaaatag 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 661
Length adjustment: 9
Effective length of query: 253
Effective length of database: 652
Effective search space: 164956
Effective search space used: 164956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
