Query= MSMg01no164_e06.b1 MSMg01no164_e06.b1 CHROMAT_FILE:
MSMg01no164_e06.b1 PHD_FILE: MSMg01no164_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:04 2005
(319 letters)
>mm_chr9_111226948_111227666
Length = 719
Score = 601 bits (311), Expect = e-176
Identities = 314/315 (99%)
Strand = Plus / Minus
Query: 5 gaattcactggacatcactgtgtgccttggtgtttacaagctgaaattaacacaggacta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaattcactggacatcactgtgtgccttggtgtttacaagctgaaattaacacaggacta 460
Query: 65 aaataacttgcacctagccaacctgaggagatggatttcgaaagaaagaaaaaaatagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aaataacttgcacctagccaacctgaggagatggatttcgaaagaaagaaaaaaatagaa 400
Query: 125 taacaaaatactgaatttagtaaagatccacatgtaattcctataggagcttttaaagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 taacaaaatactgaatttagtaaagatccacatgtaattcctataggagcttttaaagag 340
Query: 185 aatgcttttgaaatatccacgaacatctgagtttgcaagactaacttatagaaaaagtaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aatgcttttgaaatatccacgaacatctgagtttgcaagactaacttatagaaaaagtaa 280
Query: 245 aataaactttactcacctatcaatcttgtctttttaaaataccctgcatttctgtctggg 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 279 aataaactttactcacctatcaatcttgtcttttaaaaataccctgcatttctgtctggg 220
Query: 305 gaaattgatgattat 319
|||||||||||||||
Sbjct: 219 gaaattgatgattat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_e06.g1 MSMg01no164_e06.g1 CHROMAT_FILE:
MSMg01no164_e06.g1 PHD_FILE: MSMg01no164_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:04 2005
(521 letters)
>mm_chr9_111051656_111052576
Length = 921
Score = 978 bits (506), Expect = 0.0
Identities = 518/522 (99%), Gaps = 2/522 (0%)
Strand = Plus / Plus
Query: 1 cactgggtttggtagttagaggtcattagtgacctctgactgagtagtttcagttcagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactgggtttggtagttagaggtcattagtgacctctgactgagtagtttcagttcagtg 260
Query: 61 atttggccagaagccagactgtagtcatttgaaccaagtgtgaagtgaggagggagctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttggccagaagccagactgtagtcatttgaaccaagtgtgaagtgaggagggagctat 320
Query: 121 gtgagaactgggct-ccaagagagactgtagatctgtgctgggtgcggattccttactca 179
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgagaactgggctgccaagagagactgtagatctgtgctgggtgcggattccttactca 380
Query: 180 attttttaagatgggacagaacttgttcccaattttgatgagccaatagaagaagaagct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attttttaagatgggacagaacttgttcccaattttgatgagccaatagaagaagaagct 440
Query: 240 aagataggaaagaaagacagggtagctgggacagggtcccggctggtgagtcttaatggc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagataggaaagaaagacagggtagctgggacagggtcccggctggtgagtcttaatggc 500
Query: 300 agtttggagggatgtgtttgagggtgatgggcttggggcagctctgacctcaaacaggaa 359
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 agtttggagggatgtgtttgagggtgatgggcttggggcat-tctgacctcaaacaggaa 559
Query: 360 ggacagctcttcagtgggacttgagatgaaggaaaaaggacagcatagagcctgggacgc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggacagctcttcagtgggacttgagatgaaggaaaaaggacagcatagagcctgggacgt 619
Query: 420 ctgacttgggcaggaagatgtggagggaatgcctccttcaggtcacaagctgtattttct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctgacttgggcaggaagatgtggagggaatgcctccttcaggtcacaagctgtattttct 679
Query: 480 acttcaagctcatctttagacacatttgaaagattccttctg 521
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acttcaagctcatctttagacacatttgaaagattccttctg 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
