TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CAGCAATCCCGCTAGAGCCTCTTCAACTCCTTCTGAGGATGCTGACTCAA
ATGACCTAAGGACAGGGACAGATGAGACCCCAGCACTGCAGGGTCCGATT
AAATTTTGCACTGCAGCACTAGACCAAATGTGAGGCATGTGAACCTTTGG
GTACACATCCAACCTATATCTAAAGCACAAGCAAAAGTGAAGTGTGATTT
TATGTCTTAAAGAGTCCTTTAACTTTAATTATCTGTATATATGAAAGGGT
ATGTGCATGTATGTGAGCAGGTTCCTACCCAGCTCAGAAAATGTCTCTAG
ATCCCCTGGTGCTGGAGATAAAAATAGTTGTAAACAGATTTGTGGATGCG
GGAACCATATACAGGTCCTCTTAGCAGTGAGTGCTCTTGAGTACTATGCC
AGTTTCCAGCCCTCAAAAGTTAGTTCAAACACGTACTTAACTGTGGGCCA
AAGATCCACCTGGATATACAGCACAATAAATTAATTTTAAAAGCAGGTAG
TTTTTAATTAAAAAAACATGCTAGACCAATGACTATAAAATTTTTCCACT
CCCTTTCCTTCATGCAATCAAATTCTATCAGATAACAAACTAAGAATATT
ACTTGTATATCATCCTAAATTTTGCAAATTAAAAAATCTCTATATGTTTA
TTAATTTTTTTTCCTGAGTGGTCAGAAAA

AAAAATGAGCCGGAAAAAGAGGTATCTTTATTGGGTGGNNNGANAAGATT
CAAAAAAAGGGGGGNAAAAAAAGGAGATGAAGGTGGGGGGGGGATAGGTA
GAAAGAAATGGGGGAGGAATATATGATAGGGAAGGAGAGGTATAATGGGA
AGAGAAGGAAGAAAGAGAAGTTGGGGGGTAAAATTAGGGGTAGTAAAAGG
TGGGGGAGGTGGGAGGGAGAGGGTGGATGTAATGGGTAAGGGAAAAGTAT
AAAAATATTGATTTGGAGATAATTGGGTTGGGTGAAANAGAAGGGAGGGT
GATTTTTTTTTTTTTTGTAAATGAGAAAGGGAGGGGAAGTTAGTTTGAAT
GAAGAGTGACAGGTGGGGAGGGATAAAGGTTGGCGGAAGGGGGGGTAGAA
TGAGGGGGCCCCGGGAAAAAAATTGAATGATAAGAGAGAAGGAGGTTGGG
GAATGAGTATAAGTAGAAATTAGAATAATATAAGTGTAGGGGATTATTGG
TAAGAGAAGGAGAAGTGAGGGAGATAAGAGATAGTTGAATATAAGGTGGG
AGAGTGTAGGTAGGGGAGGGTAGAGGAATGGGGAATGGGATGGAATTAAG
GAAGTGGGATAAGTGAAGGAAGAAGACGTGAAGGATTAGTGAGATAATGG
ATGTTGGGATATTTATATTAGTGTGGTGTGTGAGGAAGAGAGGGGTGGGA
AAGGAAGATGGGATGGAGAGTGGGAATGTGAGGCGAGTATAGATAAGCGA
GGAGGATAGGTAGGAAGGATGTGGGAGAAN

Query= MSMg01no165_e05.b1 MSMg01no165_e05.b1 CHROMAT_FILE:
MSMg01no165_e05.b1 PHD_FILE: MSMg01no165_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:21 2005
         (688 letters)



>mm_chr9_5771892_5772979
          Length = 1088

 Score = 1247 bits (645), Expect = 0.0
 Identities = 675/685 (98%), Gaps = 1/685 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagcaatcccgctagagcctcttcaactccttctgaggatgctgactcaaatgac 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcaatcccgttagagcctcttcaactccttctgaggatgctgactcaaatgac 264

                                                                       
Query: 65  ctaaggacagggacagatgagaccccagcactgcagggtccgattaaattttgcactgca 124
           ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||
Sbjct: 265 ctaaggacagggacagatgagaccccagcactgcagggtccaattaacttttgcattgca 324

                                                                       
Query: 125 gcactagaccaaatgtgaggcatgtgaacctttgggtacacatccaacctatatctaaag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcactagaccaaatgtgaggcatgtgaacctttgggtacacatccaacctatatctaaag 384

                                                                       
Query: 185 cacaagcaaaagtgaagtgtgattttatgtcttaaagagtcctttaactttaattatctg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cacaagcaaaagtgaagtgtgattttatgtcttaaagagtcctttaactttaattatctg 444

                                                                       
Query: 245 tatatatgaaagggtatgtgcatgtatgtgagcaggttcctacccagctcagaaaatgtc 304
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 tatatatgaaagggtatgtgcatgtatgtgagcaggttcctacccagctcggaaaatgtc 504

                                                                       
Query: 305 tctagatcccctggtgctggagataaaaatagttgtaaacagatttgtggatgcgggaac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctagatcccctggtgctggagataaaaatagttgtaaacagatttgtggatgcgggaac 564

                                                                       
Query: 365 catatacaggtcctcttagcagtgagtgctcttgagtactatgccagtttccagccctca 424
           ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 565 catatacaggtcctcttagcaatgagtgctcttgagtactatgccagcttccagccctca 624

                                                                       
Query: 425 aaagttagttcaaacacgtacttaactgtgggccaaagatccacctggatatacagcaca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaagttagttcaaacacgtacttaactgtgggccaaagatccacctggatatacagcaca 684

                                                                       
Query: 485 ataaattaattttaaaagcaggtagtttttaattaaaaaaacatgctagaccaatgacta 544
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agaaattaattttaaaagcaggtagtttttaattaaaaaaacatgctagaccaatgacta 744

                                                                       
Query: 545 taaaatttttccactccctttccttcatgcaatcaaattctatcagataacaaactaaga 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 taaaatttttccactccctttccttcatgcaatcaaattctatcagataacaaactaaga 804

                                                                       
Query: 605 atattacttgtatatcatcctaaattttgcaaattaaaaaa-tctctatatgtttattaa 663
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 805 atattacttgtatatcatcctaaattttgcaaattaaaaaaatctctatatgtttattac 864

                                    
Query: 664 ttttttttcctgagtggtcagaaaa 688
           |||||||||||||||||||||||||
Sbjct: 865 ttttttttcctgagtggtcagaaaa 889


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space:   730884
Effective search space used:   730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)