Query= MSMg01no166_d01.b1 MSMg01no166_d01.b1 CHROMAT_FILE:
MSMg01no166_d01.b1 PHD_FILE: MSMg01no166_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:36 2005
(648 letters)
>mm_chr9_97714722_97715769
Length = 1048
Score = 1208 bits (625), Expect = 0.0
Identities = 640/645 (99%)
Strand = Plus / Minus
Query: 4 ggaattctcctctttccttgctaggcccaatctaggactataccccaccatccaccatgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ggaattctcctctttccttgctaggcccaatctaggactataccccaccatccaccatgt 789
Query: 64 tcctttgtttactctcttcatctaccacgatgctttccctgacccttagtctagttattt 123
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 788 tcctttgtttactctcttcatctaccactatgctttccctgacccttagtctagttattt 729
Query: 124 ccaaaagtatacatgtatatacaatcgaaaattaatcaaccaattgttgcccttaaacat 183
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 728 ccaaaagtatacatgtatatacaatcggaaattaatcaaccaattgttgcccttaaacat 669
Query: 184 tcccaaaccagaaatctgggttaggccaattttatccatttgagaaaaatcactggagat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tcccaaaccagaaatctgggttaggccaattttatccatttgagaaaaatcactggagat 609
Query: 244 gaattttgtctaggtaattagcatcagcagtacaagcttgtcactcattggtgatcttcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gaattttgtctaggtaattagcatcagcagtacaagcttgtcactcattggtgatcttcc 549
Query: 304 actgcacattcctggaacttcaccccatgacagttgccatgatcagtatcagtgagaaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 actgcacattcctggaacttcaccccatgacagttgccatgatcagtatcagtgagaaca 489
Query: 364 gaggtcccacgcatcaatttggagaaggatatcttaggctttgagagtctcaaaaatacc 423
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gaggtcccacgtatcaatttggagaaggatatcttaggctttgagagtctcaaaaatacc 429
Query: 424 ttttctatttgctactgttcgaaatgaatgctttcagtgcctttaagattgctaccacca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 428 ttttctatttgctactgttcgaaatgaatgctttcagtgcctttaagattgctaccatca 369
Query: 484 ggatttctcttttaatgcatgatcattgcctgtcaagtgctctgaaaatgcaggagccaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggatttctcttttaatgcatgatcattgcctgtcaagtgctctgaaaatgcaggagccaa 309
Query: 544 attcacttcagaaattcatcatgatgctcttaacctatggcatccttggtaggaatgact 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 attcacttcagaaattcatcatgatgctcttaacctatggcatccttggtaggaatgact 249
Query: 604 tatgagtggcaattcctacaactttgtgtggctgtttttacaact 648
||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 248 tatgagtggcaattcctacaactttgtgtggctgtttctacaact 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_d01.g1 MSMg01no166_d01.g1 CHROMAT_FILE:
MSMg01no166_d01.g1 PHD_FILE: MSMg01no166_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:37 2005
(340 letters)
>mm_chr9_97553749_97554490
Length = 742
Score = 634 bits (328), Expect = 0.0
Identities = 338/342 (98%), Gaps = 2/342 (0%)
Strand = Plus / Plus
Query: 1 ccaggagcactgcagtggtttagagggaagacatgctgtgagatttggccttggatgctg 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 ccaggagcactgcagtggtttagagggaagacacgctgtgagatttggccttggatgctg 260
Query: 61 actgacttggttgagaagtagagcacaaggacaaggctccatctttggaaggagcctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgacttggttgagaagtagagcacaaggacaaggctccatctttggaaggagcctgaa 320
Query: 121 ggaggggggg--tcatcattaaccataggcagaaacagaagtaaaatgccatatggggca 178
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagggggggggtcatcattaaccataggcagaaacagaagtaaaatgccatatggggca 380
Query: 179 tggtggaaacatcagttaccatggctaccctgttagcgttatgggatgaagctagttaga 238
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 tggtggaaacatcagttaccatggctaccctgttaacgttatgggatgaagctagttaga 440
Query: 239 cataaggcagagcccaaatgactgagtaccatgaccattccatatgatgtcactgtacag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cataaggcagagcccaaatgactgagtaccatgaccattccatatgatgtcactgtacag 500
Query: 299 acggggaaaatgtcccccttggtgtgggtgtcaacatagagc 340
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acggggaaaatgtcccccttggtgtgggtgtcaacatagagc 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 742
Length adjustment: 9
Effective length of query: 331
Effective length of database: 733
Effective search space: 242623
Effective search space used: 242623
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
