Query= MSMg01no166_e24.b1 MSMg01no166_e24.b1 CHROMAT_FILE:
MSMg01no166_e24.b1 PHD_FILE: MSMg01no166_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:46 2005
(312 letters)
>mm_chr9_111002393_111003104
Length = 712
Score = 339 bits (175), Expect = 2e-97
Identities = 187/191 (97%)
Strand = Plus / Plus
Query: 122 gacatggttttcttattccttagattcctatgtaacataggagaatgcagaatgacctta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gacatggttttcttattccttagattcctatgtaacataggagaatgcagaatgacctta 381
Query: 182 tattctaaagttctcggtagttgtgtcttggctatctaaatttataatatgctaattgaa 241
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tagtctaaagttctcggtagttgtgtcttggctatctaaatttataatatgctaattgaa 441
Query: 242 catttattgttaacgagcaattaaaagaaggggcttttctacgttacttagccacagtaa 301
||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 442 catttattgttaatgagcaattaaaagaaggggcttttcaatgttacttagccacagtaa 501
Query: 302 tgaggatctct 312
|||||||||||
Sbjct: 502 tgaggatctct 512
Score = 192 bits (99), Expect = 3e-53
Identities = 108/111 (97%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 26 ctggcctcagactcagagattcacctgctgctgcctcctaagtgttgagattaaaagtgt 85
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggcctcagactcagagattcacttgctgctgcctcctaagtgttgagattaaaagtgt 60
Query: 86 ggaacacactgcctggctttttttttt-ttttttttggacatggttttctt 135
||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 61 ggaacacactgcctggcttttttttttcttttttttagacatggttttctt 111
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_e24.g1 MSMg01no166_e24.g1 CHROMAT_FILE:
MSMg01no166_e24.g1 PHD_FILE: MSMg01no166_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:46 2005
(559 letters)
>mm_chr9_111162664_111163622
Length = 959
Score = 605 bits (313), Expect = e-177
Identities = 313/313 (100%)
Strand = Plus / Minus
Query: 1 tgggtggtctgattgagtaaaaaccagagggacaattgtgagttaagtgttttgtaggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tgggtggtctgattgagtaaaaaccagagggacaattgtgagttaagtgttttgtaggta 254
Query: 61 gcctgagctgggagtcctgtttcaagacatctgtgttttgttgggttttttggttgtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gcctgagctgggagtcctgtttcaagacatctgtgttttgttgggttttttggttgtttt 194
Query: 121 tgtttttgttttttgttatgccacacctggggcttctagtgactgactcccttctgtggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tgtttttgttttttgttatgccacacctggggcttctagtgactgactcccttctgtggc 134
Query: 181 aggataaaattcaaaggtttgtttcatcttgtcacccgatgccttcctgtgctggatagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aggataaaattcaaaggtttgtttcatcttgtcacccgatgccttcctgtgctggatagt 74
Query: 241 tttatgacatgctaaaatcatttaagaagagggaaccttaatttaaaaaatgcttcccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tttatgacatgctaaaatcatttaagaagagggaaccttaatttaaaaaatgcttcccta 14
Query: 301 agatctggctgta 313
|||||||||||||
Sbjct: 13 agatctggctgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
