Query= MSMg01no166_m09.b1 MSMg01no166_m09.b1 CHROMAT_FILE:
MSMg01no166_m09.b1 PHD_FILE: MSMg01no166_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:22 2005
(235 letters)
>mm_chr9_70534189_70534823
Length = 635
Score = 427 bits (221), Expect = e-124
Identities = 227/229 (99%), Gaps = 2/229 (0%)
Strand = Plus / Plus
Query: 8 ttcatcctgtaa-ctactacagttctagctaaataggtgttcagtgagaaccagggattg 66
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttcatcctg-aacctactacagttctagctaaataggtgttcagtgagaaccagggattg 266
Query: 67 ttgggcatctttaattggttggagttttgatgccacagtttgaatgagaagaaaagtaaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttgggcatctttaattggttggagttttgatgccacagtttgaatgagaagaaaagtaaa 326
Query: 127 aaatactaaatttatcagagtggaggaaatgccaggatgtaagcatacagttccaattat 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaatactaaatttatcagagtggaggaaatgccaggatgtaagcatacagttccaattat 386
Query: 187 atattgtagttatattgtagtgaggtaaaatttggtgaaaatgtcacct 235
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atattgtagttatattgtagtgaggtaaaatttggtgaaaatgtcacct 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no166_m09.g1 MSMg01no166_m09.g1 CHROMAT_FILE:
MSMg01no166_m09.g1 PHD_FILE: MSMg01no166_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:22 2005
(326 letters)
>mm_chr9_70650988_70651713
Length = 726
Score = 600 bits (310), Expect = e-176
Identities = 322/326 (98%)
Strand = Plus / Minus
Query: 1 ccatcaccctgtaagtcccggtgtggcccatctgtggtgatggcatacttgtttctctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ccatcaccctgtaagtcccggtgtggcccatctgtggtgatggcatacttgtttctctta 467
Query: 61 cagactccacttctccttgggcactttccaccatggctgccccaaacatgctgggcaatg 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 466 cagactccacttctccttgggcactttccaccatggctgtcccaaacatgctgggcaatg 407
Query: 121 ggattcctacccactcctgtctcacattgcatctcaggctcacccagctcagggaaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ggattcctacccactcctgtctcacattgcatctcaggctcacccagctcagggaaggaa 347
Query: 181 ctctgagcacccatccatgaacgtggtggggctaccgccctgtgaacaaagagaagccag 240
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 346 ctctgagctcccatccatgaacgtggtggggctatcgccctgtgaacaaagagaagccag 287
Query: 241 aggtgtcccccctcaagtgtgcaaagcagacaagacccttctcccaagggttgggagaag 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aggtggcccccctcaagtgtgcaaagcagacaagacccttctcccaagggttgggagaag 227
Query: 301 gtgtgagggagaggcagaggtcctca 326
||||||||||||||||||||||||||
Sbjct: 226 gtgtgagggagaggcagaggtcctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
