Query= MSMg01no167_j21.b1 MSMg01no167_j21.b1 CHROMAT_FILE:
MSMg01no167_j21.b1 PHD_FILE: MSMg01no167_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:25 2005
(378 letters)
>mm_chr9_32154219_32154994
Length = 776
Score = 636 bits (329), Expect = 0.0
Identities = 354/363 (97%), Gaps = 4/363 (1%)
Strand = Plus / Plus
Query: 17 gaattcctagttaacaagtttttctctttagaatatgacacttacaggaaattatttttt 76
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaattcctagttaaaaagttt--ctctttagaatatgacacttacaggaaattatttttt 274
Query: 77 cacctatttatagaaattccatttgcatttatgaggctagtaatgtctcataaatatttc 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cacctatttatagaaattccatttgcatttatgaggctagtaatgtctcataaatatttc 334
Query: 137 ctgccagataaaatattaattaaaagaatttgttgagttatactcccaagtcctaactaa 196
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 335 ctgccagataaaatattaattaaaagaatttgttgagttatactctcaagtcctaactaa 394
Query: 197 atctcttttaagacaaatattttaagtactgttttcttatgctaggaggatctctcatcc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atctcttttaagacaaatattttaagtactgttttcttatgctaggaggatctctcatcc 454
Query: 257 atccccgtgtttgttaataagccctccaggaacagtagatatcaatcaatgaggttttcc 316
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 attcccgtgtttgttaataagccctccaggaacagtagatatcaatcaatgaggttttcc 514
Query: 317 atgatatctaattaatagtcagctggcaacaatgcaacttataaaaa-tactaaaaaaat 375
| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |
Sbjct: 515 acgatatctaattaatagtcagctggcaacaatgcaacttaaaaaaaatactaaaaaa-t 573
Query: 376 agg 378
|||
Sbjct: 574 agg 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 776
Length adjustment: 9
Effective length of query: 369
Effective length of database: 767
Effective search space: 283023
Effective search space used: 283023
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_j21.g1 MSMg01no167_j21.g1 CHROMAT_FILE:
MSMg01no167_j21.g1 PHD_FILE: MSMg01no167_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:26 2005
(358 letters)
>mm_chr9_32326913_32327670
Length = 758
Score = 654 bits (338), Expect = 0.0
Identities = 353/358 (98%)
Strand = Plus / Minus
Query: 1 cacccgcaaaggtcatgctttgaattcaaggcaggaggcaaaagtgaagaaaacattttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cacccgcaaaggtcatgctttgaattcaaggcaggaggcaaaagtgaagaaaacattttg 499
Query: 61 cactgatatcccgtacgtcctgagcacactgggacctcccctcgctgcactgtggtctgc 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cgctgatatcccgtacgtcctgagcacactgggacctcccctcgctgcactgtggtctgc 439
Query: 121 tgataaggataacatggagggcaagtggcacatttccaggacaaaggacattctctggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgataaggataacatggagggcaagtggcacatttccaggacaaaggacattctctggtt 379
Query: 181 tattgcttagaagaacccactgtccacacaggagagcacggttgggtaataagccgtgga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 378 tattgcttagaagaacccactgtccacacaggagagcacggttgggtaataagctgtgga 319
Query: 241 tgagagcaaaggcaaggttggctgggggtagactggggcaggaaaggaccgccaggctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tgagagcaaaggcaaggttggctgggggtagactggggcaggaaaggaccgccaggctgc 259
Query: 301 tccgagtgccatctggggagcatttgcatggttgggaggcaccaagaggtcactgggg 358
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 258 tccgagtgccatctggggagcatttgcatggttgggaggtaggaagaggtcactgggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
