CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTGGTCTCACCACATTCCCCACCATCCTGAAGCAGCTGGTCTGAT
AGAAAGATGGAATGGCCTTTTGAAGACGCAGTTACAGCGCCAATTAGGTG
GTAACAGCTTGGAAGGCTGGGGCAGAGTTCTTCAGAAGGCAGTATATGGT
TTGAATCAGCGCTCGATATATGGTACAGTTTCACCCATAGCCAGGATTCA
TGGGTCCAGGAATCAAGGGGTGGAAAAGGGAATAGTTCCACTTACTATCA
CTCCTAGTGATCCTCTAGGAAAATTTTTGCTTCCTGTCCCCATAACTCTA
GGTTCTGCTGGCCTAGAAGTTTTGGCTCCAGAGAGGGGAGTGCTCCTACC
AGGAGCTACAACAAACATTCCATTGAACTGGAAGCTCAGACTTCCCCCTG
GTCATTTTGGGCTTCTAATGCCCTTAAACCAACAGGCTAAAAAAGGAATA
ACAGTGTTAGGAGGGGTGATAGTGAAGAATAAAAAATTACTGAACTCTTC
TTCACCCCAGAGCCCGACCCCTCCCATCTAGAGAGTGTTCTCAGAACACT
CCTGAACTCTTCACCCCAGATTGCATTCCTGAACTCTTCACCCTAGAGTT
CGAACCCTCCCAACTAATGACTGTTCCTCGAACATTTTTTGAGATAAGAG
CCTCCTGTAACAACCTCTCAATGAC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCATCATGAACAGAGTAAATGATCT
ACAGGGTGCATGACTTACTGTGGGGCTATTGGCAGTTGCTTGGGAAGGGA
AAATCTGTTTTTGGAGAATGTGGCCACTTATGGTATCCCCATGCTCCAGT
GAATGGCCCTATCCCCAGGCATACATATGCAGTACTGGCTGCACTTAGTT
GCTTACCAAAAGGGGAAAAAAGACATACAATTAGGGAGTGGACATTCATC
TATGGGAAAGAGTTAATCATATTTCATTGCATACCTATATGAAATTCTGA
ATAAAGAAAATCTTTTTAAAAAGTAAAATTAATAAAAGTATCTGTTTTTC
TCATAGGTACCAAAGATGCACAGTGGGAATTTGTACACGGCTTACTTGAA
AATTCTATTTATGGAGGACGTGTAGATAACTATTTTGATCTTAGAGTTCT
TCAGTCCTACTTGAAGCAGTTTTTTAATTCTTCAATAATTGATGTACTAA
ACCAAAGGAACAAGAAAAGCATTTTTCCATATTCCATCTCTCTCCCAAAC
TCGTGCAGCATTTTGCTAGGTAGAAGTAGTGATTTCCCAGTGCATTTCGA
GTACCTGAACACGGTCCAAACTTATTTTTGAATCATAAAATTCATGTAGA
AATGCGCACATGATGGGCGTATACAGCAN

Query= MSMg01no167_m05.g1 MSMg01no167_m05.g1 CHROMAT_FILE:
MSMg01no167_m05.g1 PHD_FILE: MSMg01no167_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:37 2005
         (618 letters)



>mm_chr9_6993458_6994474
          Length = 1017

 Score = 1131 bits (585), Expect = 0.0
 Identities = 606/613 (98%), Gaps = 1/613 (0%)
 Strand = Plus / Minus

                                                                        
Query: 6    tgaacagagtaaatgatctacagggtgcatgacttactgtggggctattggcagttgctt 65
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 tgaacagagtaaatgatctacagggtgcatgacttactgtggggctattggcagttgctt 955

                                                                        
Query: 66   gggaagggaaaatctgtttttggagaatgtggccacttatggtatccccatgctccagtg 125
            ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 954  gggaagggaaaatctgtttttggagaatgtggccacttatggtattcccatactccagtg 895

                                                                        
Query: 126  aatggccctatccccaggcatacatatgcagtactggctgcacttagttgcttaccaaaa 185
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894  aatggccctatccccaggcatacatatgcagtactggctgcacttagttgcttaccaaaa 835

                                                                        
Query: 186  ggggaaaaaagacatacaattagggagtggacattcatctatgggaaagagttaatcata 245
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834  ggggaaaaaagacataaaattagggagtggacattcatctatgggaaagagttaatcata 775

                                                                        
Query: 246  tttcattgcatacctatatgaaattctgaataaagaaaatctttttaaaaagtaaaatta 305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774  tttcattgcatacctatatgaaattctgaataaagaaaatctttttaaaaagtaaaatta 715

                                                                        
Query: 306  ataaaagtatctgtttttctcataggtaccaaagatgcacagtgggaatttgtacacggc 365
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 714  ataaaagtatctgtttttctcataggtaccaaagatgtacagtgggaatttgtacacggc 655

                                                                        
Query: 366  ttacttgaaaattctatttatggaggacgtgtagataactattttgatcttagagttctt 425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654  ttacttgaaaattctatttatggaggacgtgtagataactattttgatcttagagttctt 595

                                                                        
Query: 426  cagtcctacttgaagcagttttttaattcttcaataattgatgtactaaaccaaaggaac 485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594  cagtcctacttgaagcagttttttaattcttcaataattgatgtactaaaccaaaggaac 535

                                                                        
Query: 486  aagaaaagcatttttccatattccatctctctcccaaactcgtgcagcattttgctaggt 545
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 534  aagaaaagcatttttccatattccatctctctcccaaactcgtgcagcattttggtaggt 475

                                                                        
Query: 546  agaagtagtgatttcccagtgcatttcgagtacctgaacacggtccaaacttatttttga 605
            |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 474  agaagtagtgatttccca-tgcatttccagtacctgaacacggtccaaacttatttttga 416

                         
Query: 606  atcataaaattca 618
            |||||||||||||
Sbjct: 415  atcataaaattca 403


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1017
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1007
Effective search space:   612256
Effective search space used:   612256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)