Query= MSMg01no168_k07.b1 MSMg01no168_k07.b1 CHROMAT_FILE:
MSMg01no168_k07.b1 PHD_FILE: MSMg01no168_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:01 2005
(367 letters)
>mm_chr9_65578984_65579751
Length = 768
Score = 636 bits (329), Expect = 0.0
Identities = 347/353 (98%), Gaps = 1/353 (0%)
Strand = Plus / Minus
Query: 16 gaattc-aagccagcctgggctaccccgtgagacttccctcaaatacaagaaaataaggc 74
|||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 413 gaattcaaagccagcctgggctacaaagtgagacttccctcaaataaaagaaaataaggc 354
Query: 75 cagtcatgataacatatgtttaatatcagtatttgctaagattgggaggttaagggcatc 134
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 353 cagtcatgataacatatgtttaatatcagtatttgttaagattgggaggttaagggcatc 294
Query: 135 ctttgctatctacatagggaatctgaggccaacctgagtcttctaagtaaacaaaaatag 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ctttgctatctacatagggaatctgaggccaacctgagtcttctaagtaaacaaaaatag 234
Query: 195 atcgataaataaacaaaaatagataggtagacagacagacagatagatagcttctagtct 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 atcgataaataaacaaaaatagataggtagacagacagacagatagatagcttctagtct 174
Query: 255 gagatgttgtcatctaaactacatgtttgtagtggtatcatgaggtagaacttgagagga 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gagatgttgtcatctaaactacatgtttgtagtggtatcatgaggtagaacttgagagga 114
Query: 315 aaagacttagaactatgttaagtacagaaagcagtatgtcctctaatggtctt 367
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 aaagacttagaactatgttaagtacagaaagcagtatgtcctctaatggtctt 61
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 768
Length adjustment: 9
Effective length of query: 358
Effective length of database: 759
Effective search space: 271722
Effective search space used: 271722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_k07.g1 MSMg01no168_k07.g1 CHROMAT_FILE:
MSMg01no168_k07.g1 PHD_FILE: MSMg01no168_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:01 2005
(324 letters)
>mm_chr9_65476283_65477006
Length = 724
Score = 611 bits (316), Expect = e-179
Identities = 322/324 (99%)
Strand = Plus / Plus
Query: 1 ctctttggcaaaggaagaagacttcgcgagacttataggaagatttgcaggaggggacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 ctctttggcaaaggaagaagacttcgcgagacttataggaagatttgcaggaggggaaag 260
Query: 61 tgtggtagaggtatctgaggacgcacaagattgaaaacacctggagatgctggaagctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggtagaggtatctgaggacgcacaagattgaaaacacctggagatgctggaagctgg 320
Query: 121 aagaaccttaaaactctgggaaagtgtagcacctaacctcggattatcagtgcctgactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaaccttaaaactctgggaaagtgtagcacctaacctcggattatcagtgcctgactc 380
Query: 181 ttgcagaaagcagggcctgacccaagcattagcactagtgtgtgtagtggcaattctgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcagaaagcagggcctgacccaagcattagcactagtgtgtgtagtggcaattctgtg 440
Query: 241 ttaccaataaataagtatcgtcaagtacacaggcccgggtcacagtaggggttcaacaat 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaccaataaataagtatagtcaagtacacaggcccgggtcacagtaggggttcaacaat 500
Query: 301 tacttcccaaatgggtgaacatat 324
||||||||||||||||||||||||
Sbjct: 501 tacttcccaaatgggtgaacatat 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
