Query= MSMg01no170_e18.b1 MSMg01no170_e18.b1 CHROMAT_FILE:
MSMg01no170_e18.b1 PHD_FILE: MSMg01no170_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:13 2005
(318 letters)
>mm_chr9_118354321_118355043
Length = 723
Score = 569 bits (294), Expect = e-166
Identities = 310/318 (97%), Gaps = 5/318 (1%)
Strand = Plus / Minus
Query: 5 gaattcaaagaagataacgatttaaccaccacggcatattccaa-----cccccccgccc 59
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 522 gaattcaaagaagataacgatttaaccaccacggcatattccaaccccccccccccgccc 463
Query: 60 ccagcttttctccttcacccatgtctgctctcctccccccatccccacctcccaccccag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ccagcttttctccttcacccatgtctgctctcctccccccatccccacctcccaccccag 403
Query: 120 ccccaatgtgcgttctttgcctctcttcacggctttgtgtgggtgtccagtacaggaatt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ccccaatgtgcgttctttgcctctcttcacggctttgtgtgggtgtccagtacaggaatc 343
Query: 180 tgagtcttccccgaggaattcatgggcctgacaggaagctgaggtgaagaactcggagta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tgagtcttccccgaggaattcatgggcctgacaggaagctgaggtgaagaactcggagta 283
Query: 240 agtagccaggccgcaggtgcgatccagagtgcccccaccccagtggatctgctcgcagca 299
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 282 agtagccaggccccaggtgcgatccagagtacccccaccccagtggatctgctcgcagca 223
Query: 300 cacaggacaaatgccctg 317
||||||||||||||||||
Sbjct: 222 cacaggacaaatgccctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 723
Length adjustment: 9
Effective length of query: 309
Effective length of database: 714
Effective search space: 220626
Effective search space used: 220626
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_e18.g1 MSMg01no170_e18.g1 CHROMAT_FILE:
MSMg01no170_e18.g1 PHD_FILE: MSMg01no170_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:13 2005
(209 letters)
>mm_chr9_118235627_118236235
Length = 609
Score = 389 bits (201), Expect = e-113
Identities = 207/209 (99%)
Strand = Plus / Plus
Query: 1 ctgatggtgtgtgaatttttatccctgaggtttcttctctcggggatgaattgatttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgatggtgtgtgaatttttatccctgaggtttcttctctcggggatgaattgatttgct 260
Query: 61 ggccaaaatggaggctgaattcctacatcaggttaaaggctgctgacacaggggtgtttg 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggccagaatggaggctgaattcctacatcaggttaaaggctgctgacacaggggtgtttg 320
Query: 121 gttagcagcctgccccaagggcttcatgtgcacagcgacaaagccgctcaccctccctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttagcagcctgccccaagggcttcatgtgcacagcgacaaagccgctcaccctccctcc 380
Query: 181 ccagcccaagtttggcagtggccagtcgc 209
|||||||||| ||||||||||||||||||
Sbjct: 381 ccagcccaagcttggcagtggccagtcgc 409
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 609
Length adjustment: 9
Effective length of query: 200
Effective length of database: 600
Effective search space: 120000
Effective search space used: 120000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
