Query= MSMg01no173_b14.b1 MSMg01no173_b14.b1 CHROMAT_FILE:
MSMg01no173_b14.b1 PHD_FILE: MSMg01no173_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:42 2005
(322 letters)
>mm_chr9_74937300_74938019
Length = 720
Score = 582 bits (301), Expect = e-171
Identities = 317/323 (98%), Gaps = 4/323 (1%)
Strand = Plus / Plus
Query: 1 aaatgatttaaacttttaaaagcttctgtatcagttgagggttgataataaaaatgaata 60
|||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||
Sbjct: 201 aaatgatttaaacttttaaaagcttctgtatccgttgagggttgat--tagaaatgaata 258
Query: 61 tcacttgtagttacctaggtactaaatatctatgaaaagtagttcagcaattattcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tcacttgtagttacctaggtactaaatatctatgaaaagtagttcagcaattattcagca 318
Query: 121 ctgcctctttttttaagaataaagagtttcaattttattttttctgcttttaaaaattaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctgcctctttttttaagaataaagagtttcaattttattttttctgcttttaaaaattaa 378
Query: 181 ttaaagtataattatatcacttccctcttcctttttcttctttcaacatctcccatgtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttaaagtataattatatcacttccctcttcctttttcttctttcaacatctcccatgtgc 438
Query: 241 ccctctcactgcctctcacattgatggac-cattttgactattattgttttacacacaca 299
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 439 ccctctcactgcctctcacattgatggactc-ttttgactattattgttttacacacaca 497
Query: 300 cacacacacacacacacacacac 322
|||||||||||||||||||||||
Sbjct: 498 cacacacacacacacacacacac 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 720
Length adjustment: 9
Effective length of query: 313
Effective length of database: 711
Effective search space: 222543
Effective search space used: 222543
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_b14.g1 MSMg01no173_b14.g1 CHROMAT_FILE:
MSMg01no173_b14.g1 PHD_FILE: MSMg01no173_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:42 2005
(293 letters)
>mm_chr9_75007272_75007964
Length = 693
Score = 543 bits (281), Expect = e-159
Identities = 290/293 (98%)
Strand = Plus / Minus
Query: 1 caaaggaccagtccaggtctccgggtatctgcagtagtaagcaactcagaaacacccgag 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 493 caaaggaccagtccaggtctccaggtatctgcagtagtaagcaactcagaaacacccgag 434
Query: 61 agtctcagcaggaaggcgttatgaataagctttcaatgttagaaggtaaaagttaatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agtctcagcaggaaggcgttatgaataagctttcaatgttagaaggtaaaagttaatgat 374
Query: 121 gaattaataattctaagaaaataatttagattgtatagaataggagaaaactctgtgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gaattaataattctaagaaaataatttagattgtatagaataggagaaaactctgtgatt 314
Query: 181 atattataagtatttatatttgattttgaaatttagaacattagtgcaattaccataatc 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atattatatgtatttatatttgattttgaaatttagaacattagtgcaattaccataatc 254
Query: 241 atgtttttaaagatgtggtcttcttatgttaccataggaacatagatctgtag 293
|||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atgttttttaagatgtggtcttcttatgttaccataggaacatagatctgtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
