CACCCCTTTTNATTCATTGGGCGCTAAGACTCCATAGGGAGAGGATCCGC
GGAATTCAGCCCTGAGGTTACCCTTAAGAGGACCCAAAATCACTTTGCCC
AGNAGGGGACTCCCTCTTTCACGGAGGACCCCAGAGCTCACCAAAGAGGA
CCCCCAAAACTGAGGAAGACTCCTCAGAACTGAATCCCAACAGATGAGAT
GAGACTTGCAGGAGAGCTGTGTGTTTAATGGGATTGTTTTCCCCCAGGCA
GCTAAATAAGTTTTCATTCTGAACACATACATATCAGCCTCCCCCCACCC
CACCGCCCCCAAACTCTTGTCTGTTTAAGCTGTTGAGATAACCAGAATTA
GATAAGAAAAGCTCAGACTGGATGTGGTGGCATGTACTTGTTATCCCAGT
GTCTTTGTGGTAGGTGCAGGAGGATCAGAAGTTTAAGGTCATCCTTGGTT
GCAGAGTAAATTTGAGGCCAGAATGAACTACATATGAGACCATGCCTCAA
AAAATTCTCATTCTACTTATAAAAAGTATGTATATAAGTATACTGATATG
TGATACACAATGTTGTATATCATAATACAGCTGTTTTATAATATGTGGTT
TATAATTTAATATAATTTATAAAATGTATTTTGTATCATAAACACATCTA
GTGGTTCACTCTTTGCAGTGCTGGAGATGGACCTGCTGCCCAAGGTCTGT
ACCACTGAGCTAACCTCCAGCCCACATTCTTAGATAGATGTCTGTGGCCG
GATATGAGACGGTGTAGGAATTTGCATCCTAAGGCATTCCATGCATACAT
TATAATGCACATGCATGTGCATGTTGCTGCATACCTGCACCCTTATCCAT
AGATTCCTCCATTGCCCCCCCTCACATGTGCTATTCGACCCCCTATCCCA
CCCTCACTCTACCTCATATCCCAATACTTCTCACCGGCTGAACTGCATGT
CCCTCCCACTAGCACACCAGAATACCCCCCCCGTTTACCCCCCTGGTGGT
TTACTCAACTGTCGCTTCTCCCTGGGCATCCTCCTCACACTTTCTTGGCT
TTTTAGCATTTTTACCCTTTCCCTCTTCTGGACCTCTGGTTATATATTTT
TGCCGAATCCTCGGCCTCTTTTTTCTTGCTCTTTTCCTCCCCGTGTCATG
GTCCCTCTTTTTCTATCAAATATTTTCTTGCGCTCTCACTCCCTTTCTCT
CTGGTGCTCT

NCCAGTCTAAAANNNNAGATGTGAGGCTGGXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCCCTCTTAAAAGCGCCATNAAG
GGAATTGAACTCGGGTTATCACCCTTGGAAGCAAGCCCCTTTACCCACCG
AACCATTTTGACACACAGACTCCTATATTCTTATCACAACCCCGAAAGAA
CTCTATCCCCCATTAAAAGTCTCAATCACACGGGCAATGCACCCAGTATT
CTTTAGGCTGAGACAGGAGGACAGCAAGGGGATTGCCCAAAATTAACCTG
TAAGCCCCACATGCCCCAGAACCGAGTAACTTCTTGAAATGCTGGGAACT
GTAGTCTTTGGAAAATAACAAAGCCTCATGGGAAAAATACAGTGGGCTAT
AGATTTGTCCTTATAATCCCCTGCAACACTTGACTGTGGACCATTCCAGC
TGGGAAATTTAAATTTAAGGAATGGTCTGGACCAAAAGCTACCTCTTGCT
CAGTATTTAATATTTAATAAAGCTTGCTTCAAATTTAACCCAAAATGGTG
AAGTTTGCTGCTGTGGCGGCGGCGGAGGCGATGGCGGCAGTTTTATTTTG
TTTTGTTTACAAATCTCAGGATTAACAAATGGAGGCCCCTGGTGGATAAT
TTCACCCCAGATTCGCTCTTTGCTTTGGGATCCTATGGTTCAAGACCAGC
CGTGAGCTGCCAAGGGTGCAGGTGCACCTTGGGATGGCTGGCCCAGCTGC
TCCAAGGTCCTCAGGAAATGCTTTCCACGCTGAGGACCCCCGAGGAGAGC
AGCCACACTCAAACAGCAAACATTTTTAGCTAGATTCCTATTAGTTTCCT
GAATTCAGGTTATGGCACACCCTATCCGCTGAATGGTGGACAATTTGACG
GGGGTTTAAACCCCCCTCGTTCAAGCACCAGGGAGAATTCCCCCCAGCCC
CACTGGTTAAATCTTGGGCTAATTTGGAATTTCTTGAATAAATTGAGATT
TGTGGGGCCCCTGAGGACCCCCTTTTTTTTGGGCCCCAAAAAAAGCCCTG
GGGTATCCCTTGTTTGTTCTCGGAAGAAAATTTTGCTAAGACCCCCCACA
AAAAACTGTTCCGCCGCGTGGTCTTTCCTCCATAATTTTTTTTGGAAGCT
CCACCCTCTCCATAATCCTTTTGGGTTC

Query= MSMg01no176_m19.b1 MSMg01no176_m19.b1 CHROMAT_FILE:
MSMg01no176_m19.b1 PHD_FILE: MSMg01no176_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:00 2005
         (563 letters)



>mm_chr9_115365999_115366961
          Length = 963

 Score = 1050 bits (543), Expect = 0.0
 Identities = 558/563 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggaccccagagctcaccaaagaggacccccaaaactgaggaagactcctcagaactgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaccccagagctcaccaaagaggacccccaaaactgaggaagactcctcagaactgaa 260

                                                                       
Query: 61  tcccaacagatgagatgagacttgcaggagagctgtgtgtttaatgggattgttttcccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccaacagatgagatgagacttgcaggagagctgtgtgtttaatgggattgttttcccc 320

                                                                       
Query: 121 caggcagctaaataagttttcattctgaacacatacatatcagcctccccccaccccacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggcagctaaataagttttcattctgaacacatacatatcagcctccccccaccccacc 380

                                                                       
Query: 181 gcccccaaactcttgtctgtttaagctgttgagataaccagaattagataagaaaagctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcccccaaactcttgtctgtttaagctgttgagataaccagaattagataagaaaagctc 440

                                                                       
Query: 241 agactggatgtggtggcatgtacttgttatcccagtgtctttgtggtaggtgcaggagga 300
           ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||
Sbjct: 441 agactggatgtggtggcatgtacttgttatcccagtgcctgggtggtaggtgcaggagga 500

                                                                       
Query: 301 tcagaagtttaaggtcatccttggttgcagagtaaatttgaggccagaatgaactacata 360
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 tcagaagtttaaggtcatccttggttgcagagtaaatttgaggtcagaatgaactacata 560

                                                                       
Query: 361 tgagaccatgcctcaaaaaattctcattctacttataaaaagtatgtatataagtatact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagaccatgcctcaaaaaattctcattctacttataaaaagtatgtatataagtatact 620

                                                                       
Query: 421 gatatgtgatacacaatgttgtatatcataatacagctgttttataatatgtggtttata 480
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 621 gatatgtgatacacaatgttgtatattataatacagctgttttataatatgtggtttata 680

                                                                       
Query: 481 atttaatataatttataaaatgtattttgtatcataaacacatctagtggttcactcttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atttaatataatttataaaatgtattttgtatcataaacacatctagtggttcactcttt 740

                                  
Query: 541 gcagtgctggagatggacctgct 563
           |||||||||||||||||||||||
Sbjct: 741 gcagtgctggagatggacctgct 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space:   527009
Effective search space used:   527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no176_m19.g1 MSMg01no176_m19.g1 CHROMAT_FILE:
MSMg01no176_m19.g1 PHD_FILE: MSMg01no176_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:00 2005
         (640 letters)



>mm_chr9_115480954_115481993
          Length = 1040

 Score = 1230 bits (636), Expect = 0.0
 Identities = 639/640 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcccctttacccaccgaaccattttgacacacagactcctatattcttatcacaaccccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gcccctttacccaccgaaccattttgacacacagactcctatattcttatcacaaccccg 781

                                                                       
Query: 61  aaagaactctatcccccattaaaagtctcaatcacacgggcaatgcacccagtattcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 aaagaactctatcccccattaaaagtctcaatcacacgggcaatgcacccagtattcttt 721

                                                                       
Query: 121 aggctgagacaggaggacagcaaggggattgcccaaaattaacctgtaagccccacatgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aggctgagacaggaggacagcaaggggattgcccaaaattaacctgtaagccccacatgc 661

                                                                       
Query: 181 cccagaaccgagtaacttcttgaaatgctgggaactgtagtctttggaaaataacaaagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cccagaaccgagtaacttcttgaaatgctgggaactgtagtctttggaaaataacaaagc 601

                                                                       
Query: 241 ctcatgggaaaaatacagtgggctatagatttgtccttataatcccctgcaacacttgac 300
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 600 ctcatgggaaaaatacagtgggctatagatttgtccttataagcccctgcaacacttgac 541

                                                                       
Query: 301 tgtggaccattccagctgggaaatttaaatttaaggaatggtctggaccaaaagctacct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tgtggaccattccagctgggaaatttaaatttaaggaatggtctggaccaaaagctacct 481

                                                                       
Query: 361 cttgctcagtatttaatatttaataaagcttgcttcaaatttaacccaaaatggtgaagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cttgctcagtatttaatatttaataaagcttgcttcaaatttaacccaaaatggtgaagt 421

                                                                       
Query: 421 ttgctgctgtggcggcggcggaggcgatggcggcagttttattttgttttgtttacaaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttgctgctgtggcggcggcggaggcgatggcggcagttttattttgttttgtttacaaat 361

                                                                       
Query: 481 ctcaggattaacaaatggaggcccctggtggataatttcaccccagattcgctctttgct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctcaggattaacaaatggaggcccctggtggataatttcaccccagattcgctctttgct 301

                                                                       
Query: 541 ttgggatcctatggttcaagaccagccgtgagctgccaagggtgcaggtgcaccttggga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttgggatcctatggttcaagaccagccgtgagctgccaagggtgcaggtgcaccttggga 241

                                                   
Query: 601 tggctggcccagctgctccaaggtcctcaggaaatgcttt 640
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tggctggcccagctgctccaaggtcctcaggaaatgcttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)