Query= MSMg01no177_c12.b1 MSMg01no177_c12.b1 CHROMAT_FILE:
MSMg01no177_c12.b1 PHD_FILE: MSMg01no177_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:40 2005
(627 letters)
>mm_chr9_97280057_97281083
Length = 1027
Score = 1174 bits (607), Expect = 0.0
Identities = 619/623 (99%)
Strand = Plus / Plus
Query: 5 gaattctacctctcgatttgcaggcagcaggaaggaagaatgaaccactgggcctagatt 64
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctacctctagatctgcaggcagcaggaaggaagaatgaaccactgggcctagatt 264
Query: 65 aagcttctgaaacttcaaagctcaccccagtaacagagatagtcaaacaaggccacaccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagcttctgaaacttcaaagctcaccccagtaacagagatagtcaaacaaggccacaccc 324
Query: 125 actctaacaaggccacatctcccaatagcgccactcactgggagcctgtgggggccattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actctaacaaggccacatctcccaatagcgccactcactgggagcctgtgggggccattt 384
Query: 185 tcattcaaaccaccacactattgtatatttgtgaacaacatagaccttactataatacat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcattcaaaccaccacactattgtatatttgtgaacaacatagaccttactataatacat 444
Query: 245 aaggggagaatggacagtagagatgggaatgctaaggaaaggtatgtccttgtaatgttg 304
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaggggaaaatggacagtagagatgggaatgctaaggaaaggtatgtccttgtaatgttg 504
Query: 305 cataagctaaaagacataaactgatagagagatcagaggtctcaggtcaaggtggtggca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cataagctaaaagacataaactgatagagagatcagaggtctcaggtcaaggtggtggca 564
Query: 365 ggccacattctctatcaggctccaagggaagtatttggtccaagctccttgtcttctaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggccacattctctatcaggctccaagggaagtatttggtccaagctccttgtcttctaat 624
Query: 425 ttattaattttaagctagtatctaaaataatgctacgtgtatactatcagaacatagtca 484
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttattaattttaagctagcatctaaaataatgctacgtgtatactatcagaacatagtca 684
Query: 485 aaagaatgaacccccttgctttagaaaatatagaaggggagatgtcagaatacaattaac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaagaatgaacccccttgctttagaaaatatagaaggggagatgtcagaatacaattaac 744
Query: 545 aggatgacatatggtgaacaatgccccgtggaactgtgagagagactccaggaaataagg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aggatgacatatggtgaacaatgccccgtggaactgtgagagagactccaggaaataagg 804
Query: 605 cagagggccatagccacattcag 627
|||||||||||||||||||||||
Sbjct: 805 cagagggccatagccacattcag 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_c12.g1 MSMg01no177_c12.g1 CHROMAT_FILE:
MSMg01no177_c12.g1 PHD_FILE: MSMg01no177_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:40 2005
(616 letters)
>mm_chr9_97344188_97345202
Length = 1015
Score = 1116 bits (577), Expect = 0.0
Identities = 607/617 (98%), Gaps = 3/617 (0%)
Strand = Plus / Minus
Query: 1 caaactttaaatttctaacaatttcgattcttgaagtttctgagtaatttgttaaatgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 caaactttaaatttctaacaatttcgattcttgaagtttctgagtaatttgttaaatgcc 756
Query: 61 tattcaacacagagagatatttattttcagcgttggcttgtaaatgcctacaaactgatt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tattcaacacagacagatatttattttcagcgttggcttgtaaatgcctacaaactgatt 696
Query: 121 catgttggtggtcattacgacacttctgtgaattggttgaataaatatgattttagaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 catgttggtggtcattacgacacttctgtgaattggttgaataaatatgattttagaatt 636
Query: 181 tcacagtaacgatgacttctgagagtttttgttgctcggacatgtggtgggatgagaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tcacagtaacgatgacttctgagagtttttgttgctcggacatgtggtgggatgagaggc 576
Query: 241 tgcacattgctttgtctgggtcagcgtctctggcgctctatcctagatccacatgggtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tgcacattgctttgtctgggtcagcgtctctggcgctctatcctagatccacatgggtga 516
Query: 301 aagaggcatagtggatgtgacag-tgctcacacaagaagttgacccttaggaggcttcct 359
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 515 aagaggcatagtggatgtgacagttg-tcacacaagaagttgacccttaggaggcttcct 457
Query: 360 tcaggacacatgagactgggagtattgcccttggagacagctagaaagatgatcagaatg 419
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tcaggacacacgagactgggagtattgcccttggagacagctagaaagatgatcagaatg 397
Query: 420 aaatgggggcctttattgagtgcctacaagttgctggagatgtgaaccgtaagataggtt 479
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 396 aaatgggggcctttattgagtgcctacaagttgctggagctgtgaaccctaagataggtt 337
Query: 480 actcctcctggtaaccatgagacccacccagaggaatcagaatgcttcctgggaacagtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 actcctcctggtaaccatgagacccacccagaggaatcagaatgcttcctgggaacagtg 277
Query: 540 actatgaacagggcctgtgccctcttttgatctggctccgcacccccatgttgacctgcc 599
|||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 276 actatgaacatggcctgc-ccctcttttgatctggctccccacccccatgttgacctgcc 218
Query: 600 tttatacacagaggcca 616
|||||||||||||||||
Sbjct: 217 tttatacacagaggcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1015
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1005
Effective search space: 609030
Effective search space used: 609030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
