Query= MSMg01no177_m10.b1 MSMg01no177_m10.b1 CHROMAT_FILE:
MSMg01no177_m10.b1 PHD_FILE: MSMg01no177_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:24 2005
(627 letters)
>mm_chr9_89308232_89309261
Length = 1030
Score = 1102 bits (570), Expect = 0.0
Identities = 611/626 (97%), Gaps = 3/626 (0%)
Strand = Plus / Plus
Query: 5 gaattcatcatagcactttgggtaagtaacaaaacttgactcactgtgatttatgcggta 64
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcagagtactttgggtaagtaacaaaacttgactcactgtgatttatgcggta 264
Query: 65 aagccattttttgcttcacacaatgagaaatccaacttaaaacacactcttagtttggtt 124
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 aagccattttttgcttcacacaatgagaaatcctacttaaaacacactcttagtttggtt 324
Query: 125 ggtttggtgtcccagagttgtcattaagggcatagactctctgctttgcttctcaaccaa 184
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtttggtgtccgagagttgtcattaagggcatagactctctgctttgcttctcaaccaa 384
Query: 185 gagcagggcaaggagtggcttgactgttaggcctacctggctcatggatagaaggtgtta 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagcaaggcaaggagtggcttgactgttaggcctacctggctcatggatagaaggtgtta 444
Query: 245 gccagttgcttgcagaacagcatgggtttttccttattcacatcaagcatttgggcctga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gccagttgcttgcagaacagcatgggtttttccttattcacatcaagcatttgggcctga 504
Query: 305 gagtagcactctcccttaaccatggatacccatactctccttccaagtgatgaggtcaac 364
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagtagcactctcccttaaccatagatacccatactctccttccaagtgatgaggtcaac 564
Query: 365 caaggccag---ttgccttaaaccaacttctcaaggccagacacatcacttttcttagaa 421
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caaggccaggtgttgccttaaaccaacttctcaaggccagacacatcacttttcttagaa 624
Query: 422 gacctcaaagttgcctagggttatattattatacacaccagtgagtagtctagattattt 481
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 625 gacctcaaagttgcctagggttatattattatacatgccagtgagtagtctagattattt 684
Query: 482 tacgctattttctttaattagtctaccagcttttctttatggcttcttcatttatcctta 541
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 685 tatgctattttctttaattagtctaccagtttttctttatggcttcttcatttatcctta 744
Query: 542 atttcaggtgacccaccacccctattcctcctctcctgtatttcctaccttcttccttgc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atttcaggtgacccaccacccctattcctcctctcctgtatttcctaccttcttccttgc 804
Query: 602 ttaaatctttccacttctctatgtgt 627
|||||||||||||| ||||| |||||
Sbjct: 805 ttaaatctttccacgtctctgtgtgt 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1030
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1020
Effective search space: 629340
Effective search space used: 629340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_m10.g1 MSMg01no177_m10.g1 CHROMAT_FILE:
MSMg01no177_m10.g1 PHD_FILE: MSMg01no177_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:24 2005
(515 letters)
>mm_chr9_89469884_89470798
Length = 915
Score = 795 bits (411), Expect = 0.0
Identities = 414/415 (99%)
Strand = Plus / Minus
Query: 1 aatgttgaaatacaagaaaccattaaggtttctagcaaaaaagaagtctaatcaaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aatgttgaaatacaagaaaccattaaggtttctagcaaaaaagaagtctaatcaaataaa 356
Query: 61 aagggcctttcctaagcacaacacccaggagaatatacataaagatttgatacagcttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aagggcctttcctaagcacaacacccaggagaatatacataaagatttgatacagcttac 296
Query: 121 tactacataatatgaaagagtcaatatatgcttacagccaggaagagaaatcagcagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tactacataatatgaaagagtcaatatatgcttacagccaggaagagaaatcagcagcaa 236
Query: 181 ctggctgctgatatttcccagtgaaatatctaaactcttccacctgaatggctgcaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ctggctgctgatatttcccagtgaaatatctaaactcttccacctgaatggctgcaatga 176
Query: 241 catcttaatgtctctgcttttccatcacccctacagttcattttctacccagaaatctga 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 175 catcttaatgtctctgcttttccatcacccctacagttcattttccacccagaaatctga 116
Query: 301 gttcaccctactcagatgacaacatgacctcaccctacaatgggccattgccttaaagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 gttcaccctactcagatgacaacatgacctcaccctacaatgggccattgccttaaagtc 56
Query: 361 tgcatgtctggctggactctcatctctttttaaatcccttacctttctatttcac 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 tgcatgtctggctggactctcatctctttttaaatcccttacctttctatttcac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
