MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-177M17
Chromosome	9 (Build37)
Map Location	49,727,369 - 49,727,653
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Htr3b, Usp28, LOC100042785, Zw10, EG629400, Tmprss5, EG235327, Drd2, Ankk1, Ttc12, Ncam1
Downstream gene	EG667975, LOC100042806, LOC100043346, LOC672372, 1600029D21Rik, Pts, Bcdo2, Tex12, Il18, Sdhd, Timm8b, AU019823, Pih1d2, Dlat, Dixdc1, 2310030G06Rik, Hspb2, Cryab, 1110032A03Rik, D630004A14Rik, Alg9, Ppp2r1b, Snf1lk2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Htr3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57014 MGI:1861899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Usp28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235323 MGI:2442293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042785 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Zw10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26951 MGI:1349478
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG629400 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629400 MGI:3644838
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Tmprss5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80893 MGI:1933407
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG235327 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235327 MGI:3646156
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Drd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13489 MGI:94924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244859 MGI:3045301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235330 MGI:2444588
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ncam1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17967 MGI:97281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG667975 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667975 MGI:3643311
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins pseudo : _no_value

name	LOC100042806 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042806
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	LOC100043346 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043346
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 mRNAs, 1709 ESTs, 10 Proteins

name	LOC672372 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	1600029D21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76509 MGI:1923759
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pts (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19286 MGI:1338783
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bcdo2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170752 MGI:2177469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tex12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66654 MGI:1913904
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16173 MGI:107936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sdhd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66925 MGI:1914175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Timm8b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30057 MGI:1353424
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AU019823 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270156 MGI:2143205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pih1d2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72614 MGI:1919864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dlat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235339 MGI:2385311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dixdc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330938 MGI:2679721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310030G06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66952 MGI:1914202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69253 MGI:1916503
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cryab (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12955 MGI:88516
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110032A03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68721 MGI:1915971
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D630004A14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382137 MGI:3584513
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alg9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102580 MGI:1924753
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppp2r1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73699 MGI:1920949
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Snf1lk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235344 MGI:2445031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htr3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384615 GeneID:57014 MGI:1861899
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 3B transcript_id : NM_020274.3

name	Usp28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46852150 GeneID:235323 MGI:2442293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 28 transcript_id : NM_175482.3

name	LOC100042785 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259927 GeneID:100042785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to hCG1646420 transcript_id : XM_001478811.1

name	Zw10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22165348 GeneID:26951 MGI:1349478
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ZW10 homolog (Drosophila), centromere/kinetochore protein transcript_id : NM_012039.1

name	Tmprss5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507651 GeneID:80893 MGI:1933407
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protease, serine 5 (spinesin) transcript_id : NM_030709.1

name	EG235327 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802762 GeneID:235327 MGI:3646156
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG235327 transcript_id : NM_177701.3

name	Drd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753679 GeneID:13489 MGI:94924
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dopamine receptor 2 transcript_id : NM_010077.1

name	Ankk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351692 GeneID:244859 MGI:3045301
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and kinase domain containing 1 transcript_id : NM_172922.2

name	Ttc12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801835 GeneID:235330 MGI:2444588
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 12 transcript_id : NM_172770.2

name	Ncam1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517688 GeneID:17967 MGI:97281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neural cell adhesion molecule 1 transcript_id : NM_001081445.1

name	Ncam1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517682 GeneID:17967 MGI:97281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neural cell adhesion molecule 1 transcript_id : NM_010875.3

name	LOC100043346 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259958 GeneID:100043346
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 mRNAs, 1709 ESTs, 10 Proteins product : similar to QM protein transcript_id : XM_001480010.1

name	1600029D21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286796 GeneID:76509 MGI:1923759
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1600029D21 gene transcript_id : NM_029639.2

name	Pts (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982767 GeneID:19286 MGI:1338783
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 6-pyruvoyl-tetrahydropterin synthase transcript_id : NM_011220.2

name	Bcdo2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131019 GeneID:170752 MGI:2177469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta-carotene 9', 10'-dioxygenase 2 transcript_id : NM_133217.2

name	Tex12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380389 GeneID:66654 MGI:1913904
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis expressed gene 12 transcript_id : NM_025687.2

name	Il18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680412 GeneID:16173 MGI:107936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 18 transcript_id : NM_008360.1

name	Sdhd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130258 GeneID:66925 MGI:1914175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : succinate dehydrogenase complex, subunit D, integral membrane protein transcript_id : NM_025848.2

name	Timm8b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305578 GeneID:30057 MGI:1353424
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of inner mitochondrial membrane 8 homolog b (yeast) transcript_id : NM_013897.1

name	AU019823 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059060 GeneID:270156 MGI:2143205
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU019823 transcript_id : NM_212449.1

name	Pih1d2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30794141 GeneID:72614 MGI:1919864
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PIH1 domain containing 2 transcript_id : NM_028300.1

name	Dlat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801999 GeneID:235339 MGI:2385311
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) transcript_id : NM_145614.3

name	Dixdc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46559409 GeneID:330938 MGI:2679721
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DIX domain containing 1 transcript_id : NM_178118.1

name	2310030G06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981164 GeneID:66952 MGI:1914202
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310030G06 gene transcript_id : NM_025865.2

name	Hspb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098126 GeneID:69253 MGI:1916503
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 2 transcript_id : NM_024441.2

name	Cryab (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892993 GeneID:12955 MGI:88516
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, alpha B transcript_id : NM_009964.2

name	1110032A03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803197 GeneID:68721 MGI:1915971
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110032A03 gene transcript_id : NM_023483.3

name	D630004A14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68051722 GeneID:382137 MGI:3584513
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D630004A14 gene transcript_id : NM_198675.2

name	Alg9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527201 GeneID:102580 MGI:1924753
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase) transcript_id : NM_133981.1

name	Ppp2r1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77539769 GeneID:73699 MGI:1920949
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform transcript_id : NM_001034085.1

name	Ppp2r1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77539775 GeneID:73699 MGI:1920949
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform transcript_id : NM_028614.2

name	Snf1lk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38569496 GeneID:235344 MGI:2445031
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SNF1-like kinase 2 transcript_id : NM_178710.3

name	Htr3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9938026 CCDS:CCDS23160.1 GeneID:57014 MGI:1861899
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004993 - serotonin receptor activity [Evidence ISS] [Evidence IDA]; GO:0005232 - serotonin-activated cation-selective channel activity [Evidence ISS] [Evidence IDA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0007210 - serotonin receptor signaling pathway [Evidence ISS] [Evidence IDA] codon_start : 1 note : 5-HT3 receptor subunit B product : 5-hydroxytryptamine (serotonin) receptor 3B precursor protein_id : NP_064670.1

name	Usp28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46852151 GeneID:235323 MGI:2442293
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : ubiquitin specific protease 28 protein_id : NP_780691.2

name	LOC100042785 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259928 GeneID:100042785
definition	codon_start : 1 product : similar to hCG1646420 protein_id : XP_001478861.1

name	Zw10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165349 CCDS:CCDS23161.1 GeneID:26951 MGI:1349478
definition	GO_component : GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005783 - endoplasmic reticulum [Evidence ISS] [Evidence IEA]; GO:0000776 - kinetochore [Evidence ISS]; GO:0005828 - kinetochore microtubule [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA]; GO:0000922 - spindle pole [Evidence ISS] GO_function : GO:0019237 - centromeric DNA binding [Evidence ISS] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence ISS] [Evidence IEA]; GO:0007126 - meiosis [Evidence ISS]; GO:0007067 - mitosis [Evidence IEA]; GO:0007093 - mitotic checkpoint [Evidence ISS]; GO:0000070 - mitotic sister chromatid segregation [Evidence ISS]; GO:0006461 - protein complex assembly [Evidence ISS]; GO:0007096 - regulation of exit from mitosis [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : centromere/kinetochore protein zw10 protein_id : NP_036169.1

name	Tmprss5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507652 GeneID:80893 MGI:1933407
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005044 - scavenger receptor activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : transmembrane protease, serine 5 (spinesin) protein_id : NP_109634.1

name	EG235327 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244152 GeneID:235327 MGI:3646156
definition	codon_start : 1 product : hypothetical protein LOC235327 protein_id : NP_808369.1

name	Drd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753680 GeneID:13489 MGI:94924
definition	GO_function : GO:0035240 - dopamine binding [Evidence IDA]; GO:0001591 - dopamine D2 receptor-like receptor activity [Evidence IMP] [Evidence IDA]; GO:0004930 - G-protein coupled receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007195 - dopamine receptor, adenylate cyclase inhibiting pathway [Evidence IGI] [Evidence IDA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0042493 - response to drug [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : D2 receptor product : dopamine receptor 2 protein_id : NP_034207.1

name	Ankk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370420 GeneID:244859 MGI:3045301
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : ankyrin repeat and kinase domain containing 1 protein_id : NP_766510.1

name	Ttc12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370132 CCDS:CCDS23163.1 GeneID:235330 MGI:2444588
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : tetratricopeptide repeat domain 12 protein_id : NP_766358.1

name	Ncam1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124517689 GeneID:17967 MGI:97281
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005021 - vascular endothelial growth factor receptor activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : neural cell adhesion molecule 1 isoform 1 protein_id : NP_001074914.1

name	Ncam1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124517683 GeneID:17967 MGI:97281
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005021 - vascular endothelial growth factor receptor activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : neural cell adhesion molecule 1 isoform 2 protein_id : NP_035005.2

name	LOC100043346 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259959 GeneID:100043346
definition	codon_start : 1 product : similar to QM protein protein_id : XP_001480060.1

name	1600029D21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286797 GeneID:76509 MGI:1923759
definition	codon_start : 1 product : placenta expressed transcript 1 protein_id : NP_083915.2

name	Pts (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7110709 CCDS:CCDS23164.1 GeneID:19286 MGI:1338783
definition	GO_function : GO:0003874 - 6-pyruvoyltetrahydropterin synthase activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : 6-pyruvoyl-tetrahydropterin synthase protein_id : NP_035350.1

name	Bcdo2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875374 GeneID:170752 MGI:2177469
definition	GO_component : GO:0005622 - intracellular [Evidence IC] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IDA] [Evidence IEA] GO_process : GO:0016119 - carotene metabolism [Evidence IDA]; GO:0042574 - retinal metabolism [Evidence NAS]; GO:0042573 - retinoic acid metabolism [Evidence NAS] codon_start : 1 note : beta-diox-II; b,b-carotene-9',10'-dioxygenase; beta-carotene 9',10'-dioxygenase 2 product : beta-carotene 9', 10'-dioxygenase 2 protein_id : NP_573480.1

name	Tex12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385150 GeneID:66654 MGI:1913904
definition	codon_start : 1 note : testis exprtessed gene 12 product : testis expressed gene 12 protein_id : NP_079963.1

name	Il18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680413 GeneID:16173 MGI:107936
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] [Evidence ISS]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005149 - interleukin-1 receptor binding [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence ISS]; GO:0042033 - chemokine biosynthesis [Evidence ISS]; GO:0042253 - granulocyte macrophage colony-stimulating factor biosynthesis [Evidence ISS]; GO:0006955 - immune response [Evidence TAS]; GO:0008625 - induction of apoptosis via death domain receptors [Evidence TAS]; GO:0042095 - interferon-gamma biosynthesis [Evidence IMP]; GO:0042231 - interleukin-13 biosynthesis [Evidence TAS]; GO:0042094 - interleukin-2 biosynthesis [Evidence ISS]; GO:0042104 - positive regulation of activated T cell proliferation [Evidence ISS]; GO:0030155 - regulation of cell adhesion [Evidence ISS]; GO:0030431 - sleep [Evidence ISS] codon_start : 1 product : interleukin 18 protein_id : NP_032386.1

name	Sdhd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229021 GeneID:66925 MGI:1914175
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005740 - mitochondrial envelope [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA] codon_start : 1 product : succinate dehydrogenase complex, subunit D, integral membrane protein protein_id : NP_080124.1

name	Timm8b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305579 GeneID:30057 MGI:1353424
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0042719 - mitochondrial intermembrane space protein transporter complex [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0045039 - protein import into mitochondrial inner membrane [Evidence IEA] codon_start : 1 product : translocase of inner mitochondrial membrane 8 homolog b protein_id : NP_038925.1

name	AU019823 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059061 CCDS:CCDS23166.1 GeneID:270156 MGI:2143205
definition	codon_start : 1 product : hypothetical protein LOC270156 protein_id : NP_997614.1

name	Pih1d2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794142 CCDS:CCDS23167.1 GeneID:72614 MGI:1919864
definition	codon_start : 1 product : PIH1 domain containing 2 protein_id : NP_082576.1

name	Dlat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542559 CCDS:CCDS23168.1 GeneID:235339 MGI:2385311
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA]; GO:0045254 - pyruvate dehydrogenase complex [Evidence TAS]; GO:0005967 - pyruvate dehydrogenase complex (sensu Eukaryota) [Evidence TAS] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004742 - dihydrolipoyllysine-residue acetyltransferase activity [Evidence TAS]; GO:0031405 - lipoic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006086 - acetyl-CoA biosynthesis from pyruvate [Evidence IC]; GO:0006096 - glycolysis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : dihydrolipoamide S-acetyltransferase product : dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) protein_id : NP_663589.2

name	Dixdc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559410 CCDS:CCDS23169.1 GeneID:330938 MGI:2679721
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0007222 - frizzled signaling pathway [Evidence IEA] codon_start : 1 product : DIX domain containing 1 protein_id : NP_835219.1

name	2310030G06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385350 CCDS:CCDS23170.1 GeneID:66952 MGI:1914202
definition	codon_start : 1 product : hypothetical protein LOC66952 protein_id : NP_080141.1

name	Hspb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098127 CCDS:CCDS23171.1 GeneID:69253 MGI:1916503
definition	GO_component : GO:0005625 - soluble fraction [Evidence IDA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA]; GO:0007525 - somatic muscle development [Evidence IGI] codon_start : 1 exception : mismatches in translation note : heat shock 27kD protein 2 product : heat shock protein 2 protein_id : NP_077761.2

name	Cryab (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753530 CCDS:CCDS23172.1 GeneID:12955 MGI:88516
definition	GO_component : GO:0043292 - contractile fiber [Evidence IDA]; GO:0005626 - insoluble fraction [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence TAS] GO_process : GO:0001747 - eye development (sensu Mammalia) [Evidence IGI]; GO:0007517 - muscle development [Evidence IGI]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence NAS] codon_start : 1 note : crystallin, alpha 2; alpha B-crystallin product : crystallin, alpha B protein_id : NP_034094.1

name	1110032A03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560116 CCDS:CCDS23173.1 GeneID:68721 MGI:1915971
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : hypothetical protein LOC68721 protein_id : NP_075972.2

name	D630004A14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68051723 CCDS:CCDS23174.1 GeneID:382137 MGI:3584513
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA] GO_process : GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA] codon_start : 1 product : hypothetical protein LOC382137 protein_id : NP_941077.2

name	Alg9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527202 CCDS:CCDS23175.1 GeneID:102580 MGI:1924753
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 product : disrupted in bipolar disorder 1 homolog protein_id : NP_598742.1

name	Ppp2r1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77539770 GeneID:73699 MGI:1920949
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform isoform a protein_id : NP_001029257.1

name	Ppp2r1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77539776 GeneID:73699 MGI:1920949
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform isoform b protein_id : NP_082890.2

name	Snf1lk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38569497 GeneID:235344 MGI:2445031
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IDA] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IDA] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008286 - insulin receptor signaling pathway [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0007243 - protein kinase cascade [Evidence IDA]; GO:0046626 - regulation of insulin receptor signaling pathway [Evidence IDA] codon_start : 1 note : salt induceable kinase 2 product : SNF1-like kinase 2 protein_id : NP_848825.2

name	EG629400 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629400
definition	number : 1 pseudo : _no_value

name	EG667975 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667975
definition	number : 1 pseudo : _no_value

name	LOC100042806 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042806
definition	number : 1 pseudo : _no_value

name	LOC672372 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672372
definition	number : 1 pseudo : _no_value

name	LOC672372 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672372
definition	number : 2 pseudo : _no_value

name	LOC672372 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672372
definition	number : 3 pseudo : _no_value

name	LOC672372 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672372
definition	number : 4 pseudo : _no_value

name	LOC672372 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672372
definition	number : 5 pseudo : _no_value

clone name	MSMg01-173H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209N12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-177M17.T7 (MSMg01no177_m17.b1)	MSMg01-177M17.TJ (MSMg01no177_m17.g1)
ACC	AG372078	AG372079
length	812	736
length of high quality (start - end)	53 (70 - 122)	285 (83 - 367)
definition	CHROMAT_FILE: MSMg01no177_m17.b1 PHD_FILE: MSMg01no177_m17.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:50:26 2005	CHROMAT_FILE: MSMg01no177_m17.g1 PHD_FILE: MSMg01no177_m17.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:50:26 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	AAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CGCGGAATTCATGTTTCATCACTCTTCCAGTCTCTGCGCCAAAGCAAGTC ACACAGAGAGGATTAAATGTGGCCGCATATTGGGAATGTGGAAATGTCCT ACTCCTCCGCCCCCCCCTCCTCCTCCCCCCCCCCCCCCCGCCCCCCCCCC CCCCCCCCCCACTTACCCCCTCCCTCTTACTCCCGCCCCCCCCCCCCCCC CCACCCCCCCCCCCTCACCCCCCCCACACCCCAACACACACCCTTCCCCC CCACCCCTCCTCCCGAGCCCCGCTTTTTTTCTCCCCCCCCTCACCCCGCC CCCCCCCCCCCCCTCCTTCCCCCCCCCCCCCCCCCCCCCCCCCCCTTCCT CCCCCATTCACTTCTCTTTCTCCTTTTTTCCCCCCCCCCCCCGGTTTTCC CCCCCCTCCCCCCCCCCCGTCATCCCTCCCCCCCTCCCCCCCCCCCCCCC CCCTCCCTTTCTCTCTTCCCTCCCTCCATCCCCTCCCCCCCCCCCCCCCC CACCCCCCTCCCTCTCCCCTCCTTTCTCCCCTCCCTCCACCCTTCCCCCC CCTCCATCACTCCCCCCCTCCCTCCCCCCTTCCCCCCCTCATCTCTCTCC CCTCACTCTCCCCCCCCCCCCCCACCCAATCACCCCCTTATCTTCGCCCC CCCCCCCTCCCTCCCCCCCCCCCCCCCTTCCCCCCCCCCCTCCCCCCCCT CCTATATTTCCCTCTCCCTTCTCCTCCCTCCCCTCCTCCCCCCTCTCTTC CTCCCCCCCCCG	NNCCCCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCCTACTCAGTATCAATT AACCACAGGCTTCTCTAGAAGCCTCGTCTAAATACTGGTGGGGTGGTGAA CGATCAGTTAGCAATGCAAAGGTAATGAATGGCCCAAGAAAACCTTTTGC AGCCAAGGAAGGAGGAAGAAACTAGAGGAAGTGTCCTGGGGAACTAGTTG AATTTGTTTCCACAAAGCCCTCCCTGTATGGGGTATGGTTGAGTTGAACC TGAGGTGACTACATTAGAGCTTATTTAAGTTGAAGGGACAGAAGGCATAG TGTAGACTGGTGTGCATGGACCACGACAGAAAGGGCCACAGTAGTATACT GGCCTTTAGATGTAATGACCCCTTCTTGGATTCACTGTTGTCCAATGATG TTTTGTAAAAGCGATACCCAGTGTTTTGGGAGCGTATCTTTTTACGAACG CATGCTATTGTTTTGAATCTTTTCTTAATGCCTTCCCATTTTTTTTTCCG CACGCAGCCATTTTTACTCTTTATCATTCAAACTTCCTGCTCCCCTAGTC CGTATATTTTTCTTTTGCTATTTTGCCTTTGACTATAATATATCTCCTCA TGTATATTTCCCCTTACAGATGTATACTATATTTATCCCTAATTCTATCA AAAGTACAACACAAAACTTTTAGTCTAAAATCTTTN
quality values	Open. Hide. 7 7 6 6 6 7 14 18 23 19 14 19 37 59 36 29 28 28 22 23 32 32 30 27 25 27 34 34 34 59 21 21 8 8 8 8 6 6 3 0 3 8 9 21 24 29 29 28 28 28 30 41 50 50 31 30 29 29 31 22 22 17 16 11 11 11 9 9 9 17 23 37 37 47 43 23 22 12 15 18 27 36 59 59 59 59 59 44 53 53 53 47 50 50 50 53 53 53 53 53 53 50 50 47 47 42 42 48 59 32 32 22 25 25 25 37 39 46 43 28 21 10 9 9 10 9 10 10 16 18 22 21 34 32 37 32 32 15 15 11 21 11 13 10 19 13 15 11 10 10 9 9 9 8 13 9 8 10 8 10 10 12 10 15 13 10 10 10 11 11 11 11 12 14 15 15 10 10 10 8 8 8 8 8 12 11 19 13 8 8 8 12 8 14 21 10 11 12 9 13 12 8 8 15 10 14 14 13 13 11 11 12 11 11 11 11 10 10 11 12 12 12 19 10 10 10 10 8 8 8 8 8 12 8 6 6 6 8 14 9 9 8 8 13 13 13 9 9 16 15 19 11 12 11 11 11 11 13 13 18 16 15 21 10 10 8 8 8 9 11 16 18 19 15 9 8 8 8 8 8 8 8 8 8 6 6 8 6 6 6 6 7 7 8 10 13 10 19 15 11 9 10 10 12 17 14 14 10 10 9 9 9 13 11 11 12 12 10 13 8 8 8 8 9 12 10 10 10 10 9 9 9 12 8 8 8 9 11 9 8 8 8 9 13 21 16 14 13 14 25 26 33 23 16 11 8 15 8 8 10 12 12 12 8 10 6 6 6 6 14 9 16 16 18 19 17 18 22 23 30 22 16 11 11 16 19 20 20 22 19 11 11 9 16 12 12 12 12 14 16 21 24 19 15 10 9 8 8 8 8 8 8 8 8 10 10 10 11 10 8 10 8 8 8 8 9 10 10 10 10 9 11 16 18 21 21 19 19 21 21 10 8 7 8 10 11 14 11 8 11 11 11 15 10 11 9 10 9 15 14 20 25 29 28 18 12 15 9 9 9 10 10 10 10 8 8 9 10 12 12 17 21 15 13 13 12 14 15 19 13 15 11 12 13 13 19 21 29 30 33 24 24 16 10 14 12 9 12 8 8 8 10 8 10 8 11 8 8 10 10 10 10 10 9 8 8 8 8 8 8 10 15 10 11 11 19 22 22 21 14 13 13 12 11 18 23 29 30 19 15 8 8 8 8 16 13 19 10 8 8 15 8 8 8 8 13 23 18 11 11 11 11 18 14 21 17 18 10 13 10 9 9 10 15 11 13 13 6 7 8 15 11 12 9 10 11 10 10 12 10 8 8 7 8 8 9 9 9 10 9 13 13 25 28 30 9 9 9 9 10 12 15 10 10 9 9 12 13 10 8 8 8 11 15 21 21 19 10 8 8 8 8 8 10 10 10 10 13 13 13 10 8 6 6 6 8 8 11 13 17 21 21 13 16 12 14 17 19 17 15 10 14 9 11 11 23 12 11 9 8 8 8 8 9 8 10 10 18 15 9 9 12 19 8 6 6 8 10 17 23 30 28 35 36 26 26 15 9 9 9 9 10 10 13 14 15 13 13 13 13 14 14 11 9 9 8 11 8 7 9 10 13 17 30 30 20 18 9 12 9 9 12 19 24 33 33 17 17 10 10 8 10 6 6 8 8 8 13 11 13 19 9 10 9 10 8 8 8 10 10 12 9 9 8 10 10 13 10 10 10 15 15 17 19 15 14 11 11 17 19 19 21 16 11 14 12 12 12 9 9 9 9 8 14 28 37 39 39 12 12 9 9	Open. Hide. 0 0 3 6 6 6 7 8 8 9 8 8 8 8 8 13 17 32 32 37 37 39 41 41 41 50 44 44 39 37 42 41 30 26 16 9 9 9 9 7 7 7 8 10 10 12 24 25 33 33 37 41 53 53 53 53 44 41 37 37 37 41 25 20 9 9 9 10 10 10 10 15 23 29 47 47 31 31 36 36 50 50 57 57 57 57 57 42 47 47 47 47 47 47 47 47 47 47 51 68 68 68 68 68 68 68 51 51 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 54 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 53 50 50 53 57 46 46 43 43 43 43 43 43 43 40 59 41 59 48 34 34 34 23 25 13 8 8 8 10 10 12 12 21 24 43 37 37 32 28 23 23 28 28 28 37 32 39 29 29 17 17 17 21 20 13 15 15 17 31 34 32 23 23 28 23 30 22 26 19 15 12 11 11 13 13 11 12 15 19 19 22 23 32 31 32 24 21 16 24 21 29 24 26 12 12 12 12 25 21 30 37 37 33 25 25 25 28 37 30 30 16 17 15 30 23 21 17 13 9 9 10 10 9 9 12 8 7 7 10 8 10 11 11 11 12 13 18 19 28 23 30 28 30 24 24 20 15 15 18 18 28 28 28 37 37 24 17 10 10 10 10 10 10 7 7 10 10 10 13 11 18 12 12 11 10 10 10 10 13 13 8 8 8 8 8 8 10 12 13 16 10 10 12 15 15 11 11 10 10 9 8 6 6 6 10 8 8 8 10 10 10 10 10 10 10 10 9 9 12 9 10 8 8 8 8 8 8 8 8 8 10 13 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 11 12 12 10 10 8 8 8 8 6 6 6 6 8 8 13 19 21 22 9 9 9 9 10 10 13 10 8 8 8 8 8 9 12 11 11 11 8 8 8 8 8 10 13 10 10 11 10 8 10 10 10 10 13 8 8 8 8 8 8 8 9 19 13 13 11 11 11 11 11 8 8 8 8 8 8 8 8 8 9 11 11 11 16 13 16 15 10 9 8 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 11 14 11 11 11 11 11 11 12 12 15 11 11 11 15 8 8 6 6 10 8 8 8 10 8 8 9 15 14 9 8 9 14 9 9 9 12 9 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 6 8 6 6 8 10 10 8 8 8 8 8 8 8 8 8 8 8 6 6 7 7 8 8 12 16 10 9 9 9 9 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no177_m17.g1 MSMg01no177_m17.g1 CHROMAT_FILE:
MSMg01no177_m17.g1 PHD_FILE: MSMg01no177_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:26 2005
         (285 letters)



>mm_chr9_49727169_49727853
          Length = 685

 Score =  505 bits (261), Expect = e-147
 Identities = 279/285 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccctactcagtatcaattaaccacaggcttctctagaagcctcgtctaaatactggtggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ccctactcagtatcaattaaccacaggcttctctagaagcctcgtctaaatactggtggg 426

                                                                       
Query: 61  gtggtgaacgatcagttagcaatgcaaaggtaatgaatggcccaagaaaaccttttgcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gtggtgaacgatcagttagcaatgcaaaggtaatgaatggcccaagaaaaccttttgcag 366

                                                                       
Query: 121 ccaaggaaggaggaagaaactagaggaagtgtcctggggaactagttgaatttgtttcca 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ccaaggaaggaggaagaaaatagaggaagtgtcctggggaactagttgaatttgtttcca 306

                                                                       
Query: 181 caaagccctccctgtatggggtatggttgagttgaacctgaggtgactacattagagctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 caaagccctccctgtatggggtatggttgagttgaacctgaggtgactacattagagctt 246

                                                        
Query: 241 atttaagttgaagggacagaaggcatagtgtagactggtgtgcat 285
           |   ||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 245 agggaagttgaagggacagaaggcagagtggagactggtgtgcat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space:   186576
Effective search space used:   186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information