XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTAAAGCAAGGCGGCTATTGAAGCTCACCTTCCTGGTGAGTTCTGGTCTG
ACCGAGAAACCCTGTGACAAATGGTAAGACTAAGAAGAAACAGAATAAGA
TTCCTGGCATCACCTCAGCCATCTGCACACATGTGAACATGCATACACAT
ACATGTATACCACAAACATGTACACGTGTAAAAGGAGAAGAAGGAAATGG
AGCTCAGAGAGGGAAACAAGAAAGCAAACATTGTCAAAGAGATTCACTTT
TCGGATTCTGAAGTGCTTTCCCTGACTCTTGTAGTGGGTCTGTTGGTATG
CTCTGACCTCACAGCAGTGCACGCTAGGCCAAAATCCAGTGCTGGCCTGA
ATGTGGTTTTGTTGCTGTTGTGTGTGTATGCACACATGTGTGTGCACACG
TGTGCATATGTATACATGTGACTGCATGGACACGTGAGTGTACATTCATG
GGGAAAAGTCAGTCCTAAGTGTCTTTCCTCAGAAGCAGTCCATCTTGTGT
TTTGGACACTGGCCTGGAACCACCTAAGCTAGACTGGCTAGGCAGTGAGC
CCTAGGGATCTGCCTGTCTCTGCCTCCCCATCACTGGGATTACAAGCATC
TGGCGTTTTCATGTTAGCTATTTGGCGGGGGGCCACCATATATATCACTA
AACTTTATTCTCTTTCCCCTTGCAG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCAGAAGATTAAGACAGGGAGATCTCTGAGTT
CAAGGTCATCTGTGATCCCAGGTGTGGTAGCACACATCTTTAATCTGGGC
TATACCATCTGGAGAACTACATAAGGACATTGGAAGAAGGAAAATTACTC
TCTTTCTCCTGCTTGCCTTGTGGGACTGAGTAACTGCTAGATCCTTGGAC
TTCCATTCACAGCTGCTGCAGACCATTGTTGGGAGTTGGACGACAGACTG
TTAGTCATCATCAAACTCCCTTACTCTATAGAGACTACGCATAAGTTCTG
TGACTCTTTAGAACCCTGACCACCACAGATTCCTAGAACCCACATTCTTT
CTATGGTTCTGGCTTAGACGAGAACAGAAGAAGAGCTTGTCTAGAGTTTA
GGCGTGGGGTGGAAGAACAGCTACATTCTAAATGCTGTGGGAAGAAGGAG
GAAAGCTGGGGCCGGCTGATGCCAGCTTTTCCTCACAGCGCACTTCTTCT
CAGTGGCTTGCCTGCCGATGTGTAGTAGACTCCAGACAAGGCAGCACCAT
TACTGACTATGCCCTGGGCCTCTCATTGTCCCAGCCTGCTCTGACTCTGA
CCTTGGGACTGCCATGAGGGGACTCTCCTCTGAGCTCTACCTCCCTCTGA
GGACTCCTCCCATGGAGAAATAT

Query= MSMg01no179_l05.b1 MSMg01no179_l05.b1 CHROMAT_FILE:
MSMg01no179_l05.b1 PHD_FILE: MSMg01no179_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:47 2005
         (630 letters)



>mm_chr9_115625685_115626714
          Length = 1030

 Score = 1143 bits (591), Expect = 0.0
 Identities = 615/623 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctaaagcaaggcggctattgaagctcaccttcctggtgagttctggtctgaccg 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gaattcctaaagcaaggtggctattgaagctcaccttcctggtgagttctggtctgaccg 584

                                                                       
Query: 65  agaaaccctgtgacaaatggtaagactaagaagaaacagaataagattcctggcatcacc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agaaaccctgtgacaaatggtaagactaagaagaaacagaataagattcctggcatcacc 524

                                                                       
Query: 125 tcagccatctgcacacatgtgaacatgcatacacatacatgtataccacaaacatgtaca 184
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 523 tcagccatctgcacacatgtgaacatgcacacacatacatgtataccacaaacatgtaca 464

                                                                       
Query: 185 cgtgtaaaaggagaagaaggaaatggagctcagagagggaaacaagaaagcaaacattgt 244
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cgtgcaaaaggagaagaaggaaatggagctcagagagggaaacaagaaagcaaacattgt 404

                                                                       
Query: 245 caaagagattcacttttcggattctgaagtgctttccctgactcttgtagtgggtctgtt 304
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cagagagattcacttttcggattctgaagtgctttccctgactcttgtagtgggtctgtt 344

                                                                       
Query: 305 ggtatgctctgacctcacagcagtgcacgctaggccaaaatccagtgctggcctgaatgt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggtatgctctgacctcacagcagtgcacgctaggccaaaatccagtgctggcctgaatgt 284

                                                                       
Query: 365 ggttttgttgctgttgtgtgtgtatgcacacatgtgtgtgcacacgtgtgcatatgtata 424
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 283 ggttttgttgctgttgtgtgtgtatgcacacatgtgtgtgcacaagtgtgcatatgtata 224

                                                                       
Query: 425 catgtgactgcatggacacgtgagtgtacattcatggggaaaagtcagtcctaagtgtct 484
           ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 223 catgtgactgcatagacacttgagtgttcattcatggggaaaagtcagtcctaagtgtct 164

                                                                       
Query: 485 ttcctcagaagcagtccatcttgtgttttggacactggcctggaaccacctaagctagac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ttcctcagaagcagtccatcttgtgttttggacactggcctggaaccacctaagctagac 104

                                                                       
Query: 545 tggctaggcagtgagccctagggatctgcctgtctctgcctccccatcactgggattaca 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tggctaggcagtgagccctagggatctgcctgtctctgcctccccatcactgggattaca 44

                                  
Query: 605 agcatctggcgttttcatgttag 627
           |||||||||||||||||||||||
Sbjct: 43  agcatctggcgttttcatgttag 21


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space:   632400
Effective search space used:   632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)