Query= MSMg01no182_n09.b1 MSMg01no182_n09.b1 CHROMAT_FILE:
MSMg01no182_n09.b1 PHD_FILE: MSMg01no182_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:42 2005
(656 letters)
>mm_chr9_6376334_6377389
Length = 1056
Score = 1137 bits (588), Expect = 0.0
Identities = 636/652 (97%)
Strand = Plus / Minus
Query: 5 gaattcctatgcttatgtatatagaaattaatgatatttgcttcttcttgccatggcact 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gaattcctatgtttatgtatatagaaattaatgatatttgcttcttcttgccatggcact 797
Query: 65 aacaaagcaacatttccatatgtattcattgcactgagattagaagcttcttagggtttt 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 796 aacaaagcaacatttccatatgcattcattgcactgagattagaagcttcttagggtttt 737
Query: 125 tgtaacctaaaggtcctttcataatcaaagtacagatgtgcatagtgttttatcgaggtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tgtaacctaaaggtcctttcataatcaaagtacagatgtgcatagtgttttatcgaggtg 677
Query: 185 gtcttgagctgcagatacagtcacatcgctcatgatgatccagctggatatcaacaagag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gtcttgagctgcagatacagtcacatcgctcatgatgatccagctggatatcaacaagag 617
Query: 245 ccatattcttagctttgccccttctcttgaaatgtccaggctcaaacttcaatacctaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ccatattcttagctttgccccttctcttgaaatgtccaggctcaaacttcaatacctaca 557
Query: 305 ataaaggataagaagtatatttcctgttacaaagcccttggatttaagtcagccaaatgc 364
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 556 ataaaggataagaagtatatttcctgttagaaagcccttggatttaagtcagccaaatgc 497
Query: 365 cactcacccattccccttctggtaatgggtgagtaaacccttggaaagttcaatgaatgg 424
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 496 cactcacccattccccttctggtaatgagtgagtaaacccttggaaagttcaatgagtgg 437
Query: 425 ggtgaacttgctgttggaacaagcacatggagatatttcttcaaataatcactaaccatg 484
|||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||
Sbjct: 436 agtgaacttgctgttggaacaagcacatgtagatatttcttcaaataaccgctaaccatg 377
Query: 485 caacatgcaggggtctactcttccatgaataatgcccctgcctcacctttagtaggaaga 544
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 376 caacatgcaggggtctacccctccatgaataatgcccctgcctcacctttagtaggaaga 317
Query: 545 tgactttaggtctcctatcttctagaatgctgacaaaaatgtctgtgtgatatacttcct 604
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 316 tgactttaggtctcctatcttctagaatgctgacaaaaatgtctctgtgatatacttcct 257
Query: 605 atgtccttctgcatctaaagctttgcctgaatccaagtggccaatgaaccca 656
|| ||||||||| |||||||||||||||||| ||||||| ||||||||||||
Sbjct: 256 atttccttctgcgtctaaagctttgcctgaacccaagtgtccaatgaaccca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_n09.g1 MSMg01no182_n09.g1 CHROMAT_FILE:
MSMg01no182_n09.g1 PHD_FILE: MSMg01no182_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:42 2005
(283 letters)
>mm_chr9_6239746_6240428
Length = 683
Score = 524 bits (271), Expect = e-153
Identities = 280/283 (98%)
Strand = Plus / Plus
Query: 1 agtttttgatggggaatgctttaggcctgtagcctgtgattagctttggcaagacccact 60
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 agtttttgatggggaaagctttaggcctgtagcctgtgattagctttggcgagacccact 260
Query: 61 gctggccaaggtccacatctgttgcagagccataagagaaagtgtatcataaggcatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctggccaaggtccacatctgttgcagagccataagagaaagtgtatcataaggcatgca 320
Query: 121 ttgccttctgccacatctgttcactttgagttcctaagtgatcagtaatagcatgttcca 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 ttgccttctgccacatctgttcactttgagttcctaagtggtcagtaatagcatgttcca 380
Query: 181 ggcagcagagagcaggtgaagctcttagcactggggcagccaaaaggaaataattgatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcagcagagagcaggtgaagctcttagcactggggcagccaaaaggaaataattgatca 440
Query: 241 ttttctctaacttttttccatgacaggcaaatatttatggggt 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttctctaacttttttccatgacaggcaaatatttatggggt 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
