TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTATTTTTAAACAAGGATCTATTTTATTTTTAAGTGTTGTGTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TGTGTGTGTGTGTGTGTGTGTATCTGTCTCTGTCTCTGTCTCTCTCTGTG
TGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTATCCTTTTTCTTTACTC
ACTCTTTTTTTTTTTATTTTCTACTCCCCTACTTTTTCCTTTTCTTTATA
CCTTTTTCCACCTTCACTTTTTTTTTTCTTTTTTTTTCCTTATTCACTGT
ACCATAACTTTTTTTTTCCCCCCCCCCCCCCTTCTCACTTTTTTTTATTT
TCCTTTTTTCTTTTTTCCCCCCCCCCCCTTAAAATATTTTTCTCCTTTTC
TCTCGCTTTCTTTTTTTTTTTACACCTACCCCCTTATTTTTTTTATTTTC
TTTACCTCCCATTTATTTTATTTTCTACATTACACTCTATTCCCCCGCAA
ATTTATATGCTTTTCACTTTTGTTTTCTACACTTCTTCTTTTTCCGCCTG
TCCTTTATTTATCTCTCTTAATTATTCTCTTATAATCCTCAACGTTTTTT
TATTTCACGCATTTCCTATTCTTTTTGATTATTTTCATAATTTATCCATT
TACTTATTCCCATCTCTCTCTTTTATCCCACCTTCTATATTTTACCTACC
CCTCCAACCATACTACCTTCTTATATACCTTATGATATTTATA

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTAGTGCCTGTGAGAACACTCCAAACAAGCAA
GACAAGAGTCTTGTGACCTCAGATTGTTCTTGGAAGGTGTTTTTGTGCCC
TGCCCAGGCACAGCAGATAAGAGTGGGTTTACTTCAGATTATCCACTGCA
ACTGGCTATTGTTATTTGTTCATAGACTTCTACAGAAAAACTGGTTTTGC
CACATGCAACTTGTCCTTGTGACTGTATGCAGCTGAACACAAGTGACCTT
TCCTAACCTTCAGGGTATTAGTTGTCTGAGGCTCTGAATAAAGTTGGCAA
TTGCATAGGACTTTAGTCTGCCTCCTTTATTGGCTCCCTTTCTCCAAGTC
CCTACATTTCTAGAACCGCGACACCCATCTTTGATCGGAACAAACAGAAG
GTCACTGTGTATTGACTCTAAGTGCACATGCCCTGGAGAACAGAACAGTC
AATTTCATAAAACAAACACTGCTAGACACGAAGGAGCAGATAGATCCTGA
TACAATCTTCAACATCATTTAGAGAAAAAAAAAATTGAACAGTGGATCAT
CAAAGTTAAACCATACTGGACGCTTCTCATATTCTAGTTAATTCTTAAAG
TGCCAGGCTTCTGACCATAACATAGTGAAACTAGAAGCCAGTAATACCAG
CCAATCTCTGAAAACAACAACA

Query= MSMg01no183_a07.g1 MSMg01no183_a07.g1 CHROMAT_FILE:
MSMg01no183_a07.g1 PHD_FILE: MSMg01no183_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:55 2005
         (603 letters)



>mm_chr9_117598717_117599717
          Length = 1001

 Score = 1116 bits (577), Expect = 0.0
 Identities = 596/603 (98%), Gaps = 2/603 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttagtgcctgtgagaacactccaaacaagcaagacaagagtcttgtgacctcagattgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagtgcctgtgagaacactccaaacaagcaagacaagagtcttgtgacctcagattgtt 260

                                                                       
Query: 61  cttggaaggtgtttttgtgccctgcccaggcacagcagataagagtgggtttacttcaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttggaaggtgtttttgtgccctgcccaggcacagcagataagagtgggtttacttcaga 320

                                                                       
Query: 121 ttatccactgcaactggctattgttatttgttcatagacttctacagaaaaactggtttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatccactgcaactggctattgttatttgttcatagacttctacagaaaaactggtttt 380

                                                                       
Query: 181 gccacatgcaacttgtccttgtgactgtatgcagctgaacacaagtgacctttcctaacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccacatgcaacttgtccttgtgactgtatgcagctgaacacaagtgacctttcctaacc 440

                                                                       
Query: 241 ttcagggtattagttgtctgaggctctgaataaagttggcaattgcataggactttagtc 300
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 ttcagggtattagttgtctgaggctctgaataaagttggcgattgcataggactttagtc 500

                                                                       
Query: 301 tgcctcctttattggctccctttctccaagtccctacatttctagaaccgcgacacccat 360
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 tgcctcctttattggctccctttctccaagtccctacatttctagaacagcgacacccat 560

                                                                       
Query: 361 ctttgatcggaacaaacagaaggtcactgtgtattgactctaagtgcacatgccctggag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttgatcggaacaaacagaaggtcactgtgtattgactctaagtgcacatgccctggag 620

                                                                       
Query: 421 aacagaacagtcaatttcataaaacaaacactgctagacacgaaggagcagatagatcct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacagaacagtcaatttcataaaacaaacactgctagacacgaaggagcagatagatcct 680

                                                                       
Query: 481 gatacaatcttcaacatcatttagagaaaaaaaaaattgaacagtggatcatcaaagtta 540
           ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 681 gatacaatcttcaacatcatttagagaaaaaaaa--ttgaacagtggatcatcaaagtta 738

                                                                       
Query: 541 aaccatactggacgcttctcatattctagttaattcttaaagtgccaggcttctgaccat 600
           ||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 739 aaccatactgggcgcttctcatcttctagttaattcttaaagtgccaggcttctggccat 798

              
Query: 601 aac 603
           |||
Sbjct: 799 aac 801


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1001
Length adjustment: 10
Effective length of query: 593
Effective length of database: 991
Effective search space:   587663
Effective search space used:   587663
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)