Query= MSMg01no183_b20.b1 MSMg01no183_b20.b1 CHROMAT_FILE:
MSMg01no183_b20.b1 PHD_FILE: MSMg01no183_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:02 2005
(651 letters)
>mm_chr9_78440913_78441968
Length = 1056
Score = 1152 bits (596), Expect = 0.0
Identities = 636/652 (97%), Gaps = 7/652 (1%)
Strand = Plus / Plus
Query: 5 gaattctctctacatctacattctgtagagagaatctattatgtactatgtggaagcatc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctctctacatctacattctgtagagagaatctattatgtactatgtggaagcatc 266
Query: 65 acctgtcaatcaaaaacctatggccaattagcttaggcaggaaataggaggtaggagttc 124
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 267 acctgtcaatcaaaaacctatggccaattagcttaggcaggaaataggaggtgggagttc 326
Query: 125 tgccatgagagaattctgggaaagagtcaggcataggagatttgttctaaactctagagg 184
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 327 tgccatgagagaattctgggaaagagtc--gcataggagatttgttctaaactctagagg 384
Query: 185 agatggatgaatgaaactgaggagaggtaactaactctgtggaagacatagaatagttca 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 agatggatgaatgaaactgaggagaggtaactaactctgtggaagacatagaatagttta 444
Query: 245 aactggttatgtaccttacaagctaattgggggaagcaagccaaagtttatggcctctac 304
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aactggttatgtaacttacaagctaattgggggaagcaagccaaagtttatggcctctac 504
Query: 305 atttattaattgtctcaagagtgattattctgggaaaaaaaggccaggtagaaaaacctc 364
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 505 atttattaattgtctcaagagtcattattctgggaaaaaaaggccaggtagaaaaacctc 564
Query: 365 acagctac-aacattcatattttcctctcaatgaaaagtgtagtggctcataaattaatt 423
|||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 565 acagctaccaacattcataatttcctctcagtgaaaagtgtagtggctcataaattaatt 624
Query: 424 gttattacttatataacagaaaggaaaaaaatcatataatctggaaaacactgctgttta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gttattacttatataacagaaaggaaaaaaatcatataatctggaaaacactgctgttta 684
Query: 484 acacaatccacatataaaaacatttcctttgtccctctgtgtctccctcccccccc---- 539
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atacaatccacatataaaaacatttcctttgtccctctgtgtctccctcccccccccccc 744
Query: 540 ttttttcctccttgtgcttgagctggaagtcgtaacctctggcatgctaggcggcagtct 599
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 745 ttttttcctccttgtgcttgagctggaagccgtaacctctggcacgctaggcggcagtct 804
Query: 600 accagactgcacagtctaccacggagctataccccaaacttcacatatttag 651
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 accagactgcacagtctaccacggagctataccccaaacttcacatatttag 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1056
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1046
Effective search space: 670486
Effective search space used: 670486
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_b20.g1 MSMg01no183_b20.g1 CHROMAT_FILE:
MSMg01no183_b20.g1 PHD_FILE: MSMg01no183_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:02 2005
(427 letters)
>mm_chr9_78558134_78558959
Length = 826
Score = 754 bits (390), Expect = 0.0
Identities = 411/418 (98%), Gaps = 1/418 (0%)
Strand = Plus / Minus
Query: 10 agccaagcatgacaccatgttcccgcaatctggcactcaggagtcgaagacagacaactc 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 826 agccaagcatgacaccatgttccctcaatctggcactcaggagtcgaagacagacaaatc 767
Query: 70 cccggagctcgctgactggccagcctacaggaaccataagccccagggtcactgagctat 129
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 cccagagctcgctgactggccagcctacaggaaccataagccccagggtcactgagctat 707
Query: 130 cctcactcaaaacaagaaggtggagagtgatggaggagatagtcagtgtcaatttatgaa 189
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 cctcactcaaaacaaaaaggtggagagtgatggaggagatagtcagtgtcaatttatgaa 647
Query: 190 ctccacatgcacatgcacaccaaatgtacacacaaaaaaattaatcttccaaatgactgt 249
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 646 ctccacatgcacatgcacaccaaatgtacacacacaaaa-ttaatcttccaaatgactgt 588
Query: 250 ataatatatatgcaaatatatacatatactgtatatacataatactccaataaaaaatta 309
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 587 ataatatatatgcaaatatatacatatactatatatacataatactccaataaaaaatta 528
Query: 310 ctcagctctttataaaaagaccttcctcgggttcatcattaatagtaactctcacatagt 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ctcagctctttataaaaagaccttcctcgggttcatcattaatagtaactctcacatagt 468
Query: 370 gatatctttttttaaacttgtgagtatatccatggtgtgtgtatgtatatgtggttta 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gatatctttttttaaacttgtgagtatatccatggtgtgtgtatgtatatgtggttta 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 826
Length adjustment: 9
Effective length of query: 418
Effective length of database: 817
Effective search space: 341506
Effective search space used: 341506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
